Gene : Phvul.008G034700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31867:SF33 - EXPANSIN-A21-RELATED Genomic Order:  361
Name:  ? Phvul.008G034700 Secondary Identifier:  ? PAC:37159010
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G034700 0.5kb upstream 0.5kb upstream 2413 true Chr08: 2843193-2845605 Phaseolus vulgaris
Phvul.008G034700 0.5kb upstream 0.5kb upstream 500 false Chr08: 2845106-2845605 Phaseolus vulgaris
Phvul.008G034700 0.5kb downstream 0.5kb downstream 2413 true Chr08: 2842693-2845105 Phaseolus vulgaris
Phvul.008G034700 0.5kb downstream 0.5kb downstream 500 false Chr08: 2842693-2843192 Phaseolus vulgaris
Phvul.008G034700 1.0kb upstream 1.0kb upstream 2913 true Chr08: 2843193-2846105 Phaseolus vulgaris
Phvul.008G034700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2845106-2846105 Phaseolus vulgaris
Phvul.008G034700 1.0kb downstream 1.0kb downstream 2913 true Chr08: 2842193-2845105 Phaseolus vulgaris
Phvul.008G034700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2842193-2843192 Phaseolus vulgaris
Phvul.008G034700 2.0kb upstream 2.0kb upstream 3913 true Chr08: 2843193-2847105 Phaseolus vulgaris
Phvul.008G034700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2845106-2847105 Phaseolus vulgaris
Phvul.008G034700 2.0kb downstream 2.0kb downstream 3913 true Chr08: 2841193-2845105 Phaseolus vulgaris
Phvul.008G034700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2841193-2843192 Phaseolus vulgaris
Phvul.008G034700 5.0kb upstream 5.0kb upstream 6913 true Chr08: 2843193-2850105 Phaseolus vulgaris
Phvul.008G034700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2845106-2850105 Phaseolus vulgaris
Phvul.008G034700 5.0kb downstream 5.0kb downstream 6913 true Chr08: 2838193-2845105 Phaseolus vulgaris
Phvul.008G034700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2838193-2843192 Phaseolus vulgaris
Phvul.008G034700 10.0kb upstream 10.0kb upstream 11913 true Chr08: 2843193-2855105 Phaseolus vulgaris
Phvul.008G034700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2845106-2855105 Phaseolus vulgaris
Phvul.008G034700 10.0kb downstream 10.0kb downstream 11913 true Chr08: 2833193-2845105 Phaseolus vulgaris
Phvul.008G034700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2833193-2843192 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315244 5265 Fabidae View MSA
124064025 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.045512 0.0 0.225558 Low  
cufflinks 4.05833 0.0 13.1736   High
cufflinks 0.0785431 0.0 0.366852 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.480787 0.0 1.90881    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain