Gene : Phvul.008G042700 P. vulgaris v2.1
Defline:  (1 of 3) 1.1.2.6 - Polyvinyl alcohol dehydrogenase (cytochrome) / PVADH Genomic Order:  442
Name:  ? Phvul.008G042700 Secondary Identifier:  ? PAC:37161361
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6464 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G042700 0.5kb upstream 0.5kb upstream 4539 true Chr08: 3646158-3650696 Phaseolus vulgaris
Phvul.008G042700 0.5kb upstream 0.5kb upstream 500 false Chr08: 3650197-3650696 Phaseolus vulgaris
Phvul.008G042700 0.5kb downstream 0.5kb downstream 4539 true Chr08: 3645658-3650196 Phaseolus vulgaris
Phvul.008G042700 0.5kb downstream 0.5kb downstream 500 false Chr08: 3645658-3646157 Phaseolus vulgaris
Phvul.008G042700 1.0kb upstream 1.0kb upstream 5039 true Chr08: 3646158-3651196 Phaseolus vulgaris
Phvul.008G042700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3650197-3651196 Phaseolus vulgaris
Phvul.008G042700 1.0kb downstream 1.0kb downstream 5039 true Chr08: 3645158-3650196 Phaseolus vulgaris
Phvul.008G042700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3645158-3646157 Phaseolus vulgaris
Phvul.008G042700 2.0kb upstream 2.0kb upstream 6039 true Chr08: 3646158-3652196 Phaseolus vulgaris
Phvul.008G042700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3650197-3652196 Phaseolus vulgaris
Phvul.008G042700 2.0kb downstream 2.0kb downstream 6039 true Chr08: 3644158-3650196 Phaseolus vulgaris
Phvul.008G042700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3644158-3646157 Phaseolus vulgaris
Phvul.008G042700 5.0kb upstream 5.0kb upstream 9039 true Chr08: 3646158-3655196 Phaseolus vulgaris
Phvul.008G042700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3650197-3655196 Phaseolus vulgaris
Phvul.008G042700 5.0kb downstream 5.0kb downstream 9039 true Chr08: 3641158-3650196 Phaseolus vulgaris
Phvul.008G042700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3641158-3646157 Phaseolus vulgaris
Phvul.008G042700 10.0kb upstream 10.0kb upstream 14039 true Chr08: 3646158-3660196 Phaseolus vulgaris
Phvul.008G042700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3650197-3660196 Phaseolus vulgaris
Phvul.008G042700 10.0kb downstream 10.0kb downstream 14039 true Chr08: 3636158-3650196 Phaseolus vulgaris
Phvul.008G042700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3636158-3646157 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792221 5273 Angiosperm View MSA
122311938 5265 Fabidae View MSA
124071700 5270 Rosid View MSA
123753626 5271 Pentapetalae View MSA
122797018 5272 Eudicot View MSA
121349158 5274 Embryophyte View MSA
123425868 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0154577 0.0 0.0766083 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0822837 0.0 0.347028 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.45735 0.0 17.7384    
cufflinks 1.5913 0.0 5.05469    
cufflinks 10.7321 0.0 28.3537    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain