Gene : Phvul.008G043200 P. vulgaris v2.1
Defline:  (1 of 1) 4.1.2.14 - 2-dehydro-3-deoxy-phosphogluconate aldolase / Phospho-2-keto-3-deoxygluconate aldolase Genomic Order:  447
Name:  ? Phvul.008G043200 Secondary Identifier:  ? PAC:37157925
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G043200 0.5kb upstream 0.5kb upstream 4022 true Chr08: 3684209-3688230 Phaseolus vulgaris
Phvul.008G043200 0.5kb upstream 0.5kb upstream 500 false Chr08: 3687731-3688230 Phaseolus vulgaris
Phvul.008G043200 0.5kb downstream 0.5kb downstream 4022 true Chr08: 3683709-3687730 Phaseolus vulgaris
Phvul.008G043200 0.5kb downstream 0.5kb downstream 500 false Chr08: 3683709-3684208 Phaseolus vulgaris
Phvul.008G043200 1.0kb upstream 1.0kb upstream 4522 true Chr08: 3684209-3688730 Phaseolus vulgaris
Phvul.008G043200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3687731-3688730 Phaseolus vulgaris
Phvul.008G043200 1.0kb downstream 1.0kb downstream 4522 true Chr08: 3683209-3687730 Phaseolus vulgaris
Phvul.008G043200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3683209-3684208 Phaseolus vulgaris
Phvul.008G043200 2.0kb upstream 2.0kb upstream 5522 true Chr08: 3684209-3689730 Phaseolus vulgaris
Phvul.008G043200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3687731-3689730 Phaseolus vulgaris
Phvul.008G043200 2.0kb downstream 2.0kb downstream 5522 true Chr08: 3682209-3687730 Phaseolus vulgaris
Phvul.008G043200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3682209-3684208 Phaseolus vulgaris
Phvul.008G043200 5.0kb upstream 5.0kb upstream 8522 true Chr08: 3684209-3692730 Phaseolus vulgaris
Phvul.008G043200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3687731-3692730 Phaseolus vulgaris
Phvul.008G043200 5.0kb downstream 5.0kb downstream 8522 true Chr08: 3679209-3687730 Phaseolus vulgaris
Phvul.008G043200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3679209-3684208 Phaseolus vulgaris
Phvul.008G043200 10.0kb upstream 10.0kb upstream 13522 true Chr08: 3684209-3697730 Phaseolus vulgaris
Phvul.008G043200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3687731-3697730 Phaseolus vulgaris
Phvul.008G043200 10.0kb downstream 10.0kb downstream 13522 true Chr08: 3674209-3687730 Phaseolus vulgaris
Phvul.008G043200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3674209-3684208 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309810 5265 Fabidae View MSA
124050609 5270 Rosid View MSA
123747018 5271 Pentapetalae View MSA
122772076 5272 Eudicot View MSA
122048375 5273 Angiosperm View MSA
121348622 5274 Embryophyte View MSA
123380942 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.58612 0.0 11.0646    
cufflinks 1.34256 0.0 10.1763    
cufflinks 2.52864 0.0 15.6652   High
cufflinks 0.775058 0.0 5.37769    
cufflinks 0.833856 0.0 5.66115    
cufflinks 2.19936 0.0 13.8419    
cufflinks 0.297632 0.0 1.23357 Low Low
cufflinks 1.69227 0.0 11.4808    
cufflinks 0.0968228 0.0 0.446808 Low Low
cufflinks 0.758971 0.0 6.68694    
cufflinks 0.643015 0.0 3.12047    

0 Strain