Gene : Phvul.008G043300 P. vulgaris v2.1
Defline:  (1 of 1) K02146 - V-type H+-transporting ATPase subunit d (ATPeV0D, ATP6D) Genomic Order:  448
Name:  ? Phvul.008G043300 Secondary Identifier:  ? PAC:37160518
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G043300 0.5kb upstream 0.5kb upstream 5512 true Chr08: 3688452-3693963 Phaseolus vulgaris
Phvul.008G043300 0.5kb upstream 0.5kb upstream 500 false Chr08: 3688452-3688951 Phaseolus vulgaris
Phvul.008G043300 0.5kb downstream 0.5kb downstream 5512 true Chr08: 3688952-3694463 Phaseolus vulgaris
Phvul.008G043300 0.5kb downstream 0.5kb downstream 500 false Chr08: 3693964-3694463 Phaseolus vulgaris
Phvul.008G043300 1.0kb upstream 1.0kb upstream 6012 true Chr08: 3687952-3693963 Phaseolus vulgaris
Phvul.008G043300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3687952-3688951 Phaseolus vulgaris
Phvul.008G043300 1.0kb downstream 1.0kb downstream 6012 true Chr08: 3688952-3694963 Phaseolus vulgaris
Phvul.008G043300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3693964-3694963 Phaseolus vulgaris
Phvul.008G043300 2.0kb upstream 2.0kb upstream 7012 true Chr08: 3686952-3693963 Phaseolus vulgaris
Phvul.008G043300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3686952-3688951 Phaseolus vulgaris
Phvul.008G043300 2.0kb downstream 2.0kb downstream 7012 true Chr08: 3688952-3695963 Phaseolus vulgaris
Phvul.008G043300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3693964-3695963 Phaseolus vulgaris
Phvul.008G043300 5.0kb upstream 5.0kb upstream 10012 true Chr08: 3683952-3693963 Phaseolus vulgaris
Phvul.008G043300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3683952-3688951 Phaseolus vulgaris
Phvul.008G043300 5.0kb downstream 5.0kb downstream 10012 true Chr08: 3688952-3698963 Phaseolus vulgaris
Phvul.008G043300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3693964-3698963 Phaseolus vulgaris
Phvul.008G043300 10.0kb upstream 10.0kb upstream 15012 true Chr08: 3678952-3693963 Phaseolus vulgaris
Phvul.008G043300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3678952-3688951 Phaseolus vulgaris
Phvul.008G043300 10.0kb downstream 10.0kb downstream 15012 true Chr08: 3688952-3703963 Phaseolus vulgaris
Phvul.008G043300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3693964-3703963 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301591 5265 Fabidae View MSA
124065072 5270 Rosid View MSA
123742149 5271 Pentapetalae View MSA
122786040 5272 Eudicot View MSA
122045239 5273 Angiosperm View MSA
121345158 5274 Embryophyte View MSA
123427776 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 79.1161 0.0 210.751 High  
cufflinks 56.5146 0.0 147.404 High  
cufflinks 61.9866 0.0 162.614 High  
cufflinks 117.809 0.0 323.8 High High
cufflinks 64.5989 0.0 169.32 High  
cufflinks 60.2746 0.0 157.637 High  
cufflinks 60.836 0.0 159.054 High  
cufflinks 59.4031 0.0 155.348 High  
cufflinks 83.293 0.0 221.786 High  
cufflinks 49.1976 0.0 127.729 High Low
cufflinks 72.272 0.0 190.467 High  

0 Strain