Gene : Phvul.008G017700 P. vulgaris v2.1
Defline:  (1 of 3) PF07889 - Protein of unknown function (DUF1664) (DUF1664) Genomic Order:  178
Name:  ? Phvul.008G017700 Secondary Identifier:  ? PAC:37158100
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G017700 0.5kb upstream 0.5kb upstream 6993 true Chr08: 1444099-1451091 Phaseolus vulgaris
Phvul.008G017700 0.5kb upstream 0.5kb upstream 500 false Chr08: 1450592-1451091 Phaseolus vulgaris
Phvul.008G017700 0.5kb downstream 0.5kb downstream 6993 true Chr08: 1443599-1450591 Phaseolus vulgaris
Phvul.008G017700 0.5kb downstream 0.5kb downstream 500 false Chr08: 1443599-1444098 Phaseolus vulgaris
Phvul.008G017700 1.0kb upstream 1.0kb upstream 7493 true Chr08: 1444099-1451591 Phaseolus vulgaris
Phvul.008G017700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1450592-1451591 Phaseolus vulgaris
Phvul.008G017700 1.0kb downstream 1.0kb downstream 7493 true Chr08: 1443099-1450591 Phaseolus vulgaris
Phvul.008G017700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1443099-1444098 Phaseolus vulgaris
Phvul.008G017700 2.0kb upstream 2.0kb upstream 8493 true Chr08: 1444099-1452591 Phaseolus vulgaris
Phvul.008G017700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1450592-1452591 Phaseolus vulgaris
Phvul.008G017700 2.0kb downstream 2.0kb downstream 8493 true Chr08: 1442099-1450591 Phaseolus vulgaris
Phvul.008G017700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1442099-1444098 Phaseolus vulgaris
Phvul.008G017700 5.0kb upstream 5.0kb upstream 11493 true Chr08: 1444099-1455591 Phaseolus vulgaris
Phvul.008G017700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1450592-1455591 Phaseolus vulgaris
Phvul.008G017700 5.0kb downstream 5.0kb downstream 11493 true Chr08: 1439099-1450591 Phaseolus vulgaris
Phvul.008G017700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1439099-1444098 Phaseolus vulgaris
Phvul.008G017700 10.0kb upstream 10.0kb upstream 16493 true Chr08: 1444099-1460591 Phaseolus vulgaris
Phvul.008G017700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1450592-1460591 Phaseolus vulgaris
Phvul.008G017700 10.0kb downstream 10.0kb downstream 16493 true Chr08: 1434099-1450591 Phaseolus vulgaris
Phvul.008G017700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1434099-1444098 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306158 5265 Fabidae View MSA
124067614 5270 Rosid View MSA
123741610 5271 Pentapetalae View MSA
122785938 5272 Eudicot View MSA
122042412 5273 Angiosperm View MSA
121350785 5274 Embryophyte View MSA
123428058 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.422 0.0 53.3754   High
cufflinks 16.4837 0.0 43.5605    
cufflinks 15.6848 0.0 41.5785    
cufflinks 18.1575 0.0 47.8284    
cufflinks 13.6917 0.0 36.8398    
cufflinks 11.2233 0.0 30.5624   Low
cufflinks 14.3607 0.0 38.2925    
cufflinks 20.0845 0.0 52.4112   High
cufflinks 14.6108 0.0 38.9385    
cufflinks 18.1914 0.0 47.8263    
cufflinks 15.1566 0.0 40.3973    

0 Strain