Gene : Phvul.008G018500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13793:SF100 - HISTONE-LYSINE N-METHYLTRANSFERASE ATX1-RELATED Genomic Order:  186
Name:  ? Phvul.008G018500 Secondary Identifier:  ? PAC:37159087
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G018500 0.5kb upstream 0.5kb upstream 13015 true Chr08: 1523758-1536772 Phaseolus vulgaris
Phvul.008G018500 0.5kb upstream 0.5kb upstream 500 false Chr08: 1523758-1524257 Phaseolus vulgaris
Phvul.008G018500 0.5kb downstream 0.5kb downstream 13015 true Chr08: 1524258-1537272 Phaseolus vulgaris
Phvul.008G018500 0.5kb downstream 0.5kb downstream 500 false Chr08: 1536773-1537272 Phaseolus vulgaris
Phvul.008G018500 1.0kb upstream 1.0kb upstream 13515 true Chr08: 1523258-1536772 Phaseolus vulgaris
Phvul.008G018500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1523258-1524257 Phaseolus vulgaris
Phvul.008G018500 1.0kb downstream 1.0kb downstream 13515 true Chr08: 1524258-1537772 Phaseolus vulgaris
Phvul.008G018500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1536773-1537772 Phaseolus vulgaris
Phvul.008G018500 2.0kb upstream 2.0kb upstream 14515 true Chr08: 1522258-1536772 Phaseolus vulgaris
Phvul.008G018500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1522258-1524257 Phaseolus vulgaris
Phvul.008G018500 2.0kb downstream 2.0kb downstream 14515 true Chr08: 1524258-1538772 Phaseolus vulgaris
Phvul.008G018500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1536773-1538772 Phaseolus vulgaris
Phvul.008G018500 5.0kb upstream 5.0kb upstream 17515 true Chr08: 1519258-1536772 Phaseolus vulgaris
Phvul.008G018500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1519258-1524257 Phaseolus vulgaris
Phvul.008G018500 5.0kb downstream 5.0kb downstream 17515 true Chr08: 1524258-1541772 Phaseolus vulgaris
Phvul.008G018500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1536773-1541772 Phaseolus vulgaris
Phvul.008G018500 10.0kb upstream 10.0kb upstream 22515 true Chr08: 1514258-1536772 Phaseolus vulgaris
Phvul.008G018500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1514258-1524257 Phaseolus vulgaris
Phvul.008G018500 10.0kb downstream 10.0kb downstream 22515 true Chr08: 1524258-1546772 Phaseolus vulgaris
Phvul.008G018500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1536773-1546772 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304597 5265 Fabidae View MSA
124064853 5270 Rosid View MSA
123751890 5271 Pentapetalae View MSA
122797093 5272 Eudicot View MSA
122046345 5273 Angiosperm View MSA
121351412 5274 Embryophyte View MSA
123427373 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.54847 0.0 4.5726   Low
cufflinks 5.10716 0.0 13.5344    
cufflinks 6.77712 0.0 17.678    
cufflinks 1.82341 0.0 5.33217   Low
cufflinks 4.7865 0.0 12.7943    
cufflinks 7.73408 0.0 20.0773    
cufflinks 6.95659 0.0 18.1215    
cufflinks 6.60657 0.0 17.2324    
cufflinks 5.85549 0.0 15.3937    
cufflinks 5.96319 0.0 15.6594    
cufflinks 4.08481 0.0 11.0349    

0 Strain