Gene : Phvul.008G017100 P. vulgaris v2.1
Genomic Order:  172 Name:  ? Phvul.008G017100
Secondary Identifier:  ? PAC:37160868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G017100 0.5kb upstream 0.5kb upstream 3088 true Chr08: 1386907-1389994 Phaseolus vulgaris
Phvul.008G017100 0.5kb upstream 0.5kb upstream 500 false Chr08: 1389495-1389994 Phaseolus vulgaris
Phvul.008G017100 0.5kb downstream 0.5kb downstream 3088 true Chr08: 1386407-1389494 Phaseolus vulgaris
Phvul.008G017100 0.5kb downstream 0.5kb downstream 500 false Chr08: 1386407-1386906 Phaseolus vulgaris
Phvul.008G017100 1.0kb upstream 1.0kb upstream 3588 true Chr08: 1386907-1390494 Phaseolus vulgaris
Phvul.008G017100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1389495-1390494 Phaseolus vulgaris
Phvul.008G017100 1.0kb downstream 1.0kb downstream 3588 true Chr08: 1385907-1389494 Phaseolus vulgaris
Phvul.008G017100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1385907-1386906 Phaseolus vulgaris
Phvul.008G017100 2.0kb upstream 2.0kb upstream 4588 true Chr08: 1386907-1391494 Phaseolus vulgaris
Phvul.008G017100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1389495-1391494 Phaseolus vulgaris
Phvul.008G017100 2.0kb downstream 2.0kb downstream 4588 true Chr08: 1384907-1389494 Phaseolus vulgaris
Phvul.008G017100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1384907-1386906 Phaseolus vulgaris
Phvul.008G017100 5.0kb upstream 5.0kb upstream 7588 true Chr08: 1386907-1394494 Phaseolus vulgaris
Phvul.008G017100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1389495-1394494 Phaseolus vulgaris
Phvul.008G017100 5.0kb downstream 5.0kb downstream 7588 true Chr08: 1381907-1389494 Phaseolus vulgaris
Phvul.008G017100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1381907-1386906 Phaseolus vulgaris
Phvul.008G017100 10.0kb upstream 10.0kb upstream 12588 true Chr08: 1386907-1399494 Phaseolus vulgaris
Phvul.008G017100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1389495-1399494 Phaseolus vulgaris
Phvul.008G017100 10.0kb downstream 10.0kb downstream 12588 true Chr08: 1376907-1389494 Phaseolus vulgaris
Phvul.008G017100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1376907-1386906 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040977 5273 Angiosperm View MSA
122309417 5265 Fabidae View MSA
124070978 5270 Rosid View MSA
123741365 5271 Pentapetalae View MSA
122790161 5272 Eudicot View MSA
121309780 5274 Embryophyte View MSA
123347441 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.384435 0.0 2.6309 Low  
cufflinks 0.312388 0.0 2.28101 Low  
cufflinks 0.336658 0.0 2.37233 Low  
cufflinks 0.131719 0.0 0.555669 Low  
cufflinks 20.4303 0.0 58.9357   High
cufflinks 0.364717 0.0 1.73172 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.157638 0.0 0.646564 Low  
cufflinks 0.128378 0.0 0.534444 Low  
cufflinks 0.0853259 0.0 0.373962 Low  
cufflinks 38.5811 0.0 110.676 High High

0 Strain