Gene : Phvul.008G017500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22847//PTHR22847:SF453 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  176
Name:  ? Phvul.008G017500 Secondary Identifier:  ? PAC:37158614
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G017500 0.5kb upstream 0.5kb upstream 5756 true Chr08: 1426655-1432410 Phaseolus vulgaris
Phvul.008G017500 0.5kb upstream 0.5kb upstream 500 false Chr08: 1431911-1432410 Phaseolus vulgaris
Phvul.008G017500 0.5kb downstream 0.5kb downstream 5756 true Chr08: 1426155-1431910 Phaseolus vulgaris
Phvul.008G017500 0.5kb downstream 0.5kb downstream 500 false Chr08: 1426155-1426654 Phaseolus vulgaris
Phvul.008G017500 1.0kb upstream 1.0kb upstream 6256 true Chr08: 1426655-1432910 Phaseolus vulgaris
Phvul.008G017500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1431911-1432910 Phaseolus vulgaris
Phvul.008G017500 1.0kb downstream 1.0kb downstream 6256 true Chr08: 1425655-1431910 Phaseolus vulgaris
Phvul.008G017500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1425655-1426654 Phaseolus vulgaris
Phvul.008G017500 2.0kb upstream 2.0kb upstream 7256 true Chr08: 1426655-1433910 Phaseolus vulgaris
Phvul.008G017500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1431911-1433910 Phaseolus vulgaris
Phvul.008G017500 2.0kb downstream 2.0kb downstream 7256 true Chr08: 1424655-1431910 Phaseolus vulgaris
Phvul.008G017500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1424655-1426654 Phaseolus vulgaris
Phvul.008G017500 5.0kb upstream 5.0kb upstream 10256 true Chr08: 1426655-1436910 Phaseolus vulgaris
Phvul.008G017500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1431911-1436910 Phaseolus vulgaris
Phvul.008G017500 5.0kb downstream 5.0kb downstream 10256 true Chr08: 1421655-1431910 Phaseolus vulgaris
Phvul.008G017500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1421655-1426654 Phaseolus vulgaris
Phvul.008G017500 10.0kb upstream 10.0kb upstream 15256 true Chr08: 1426655-1441910 Phaseolus vulgaris
Phvul.008G017500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1431911-1441910 Phaseolus vulgaris
Phvul.008G017500 10.0kb downstream 10.0kb downstream 15256 true Chr08: 1416655-1431910 Phaseolus vulgaris
Phvul.008G017500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1416655-1426654 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041408 5273 Angiosperm View MSA
122306487 5265 Fabidae View MSA
124070552 5270 Rosid View MSA
123745758 5271 Pentapetalae View MSA
122795577 5272 Eudicot View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.625 0.0 74.173   High
cufflinks 8.99565 0.0 24.1783    
cufflinks 56.2118 0.0 151.462 High High
cufflinks 11.9573 0.0 31.6646    
cufflinks 12.1573 0.0 32.1581    
cufflinks 15.7529 0.0 40.9445    
cufflinks 10.8234 0.0 28.7225    
cufflinks 9.27461 0.0 24.8016    
cufflinks 13.0267 0.0 34.2097    
cufflinks 13.7032 0.0 35.868    
cufflinks 9.34587 0.0 25.1927    

0 Strain