Gene : Phvul.008G017300 P. vulgaris v2.1
Defline:  (1 of 1) K03247 - translation initiation factor 3 subunit H (EIF3H) Genomic Order:  174
Name:  ? Phvul.008G017300 Secondary Identifier:  ? PAC:37160985
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G017300 0.5kb upstream 0.5kb upstream 4863 true Chr08: 1408155-1413017 Phaseolus vulgaris
Phvul.008G017300 0.5kb upstream 0.5kb upstream 500 false Chr08: 1408155-1408654 Phaseolus vulgaris
Phvul.008G017300 0.5kb downstream 0.5kb downstream 4863 true Chr08: 1408655-1413517 Phaseolus vulgaris
Phvul.008G017300 0.5kb downstream 0.5kb downstream 500 false Chr08: 1413018-1413517 Phaseolus vulgaris
Phvul.008G017300 1.0kb upstream 1.0kb upstream 5363 true Chr08: 1407655-1413017 Phaseolus vulgaris
Phvul.008G017300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1407655-1408654 Phaseolus vulgaris
Phvul.008G017300 1.0kb downstream 1.0kb downstream 5363 true Chr08: 1408655-1414017 Phaseolus vulgaris
Phvul.008G017300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1413018-1414017 Phaseolus vulgaris
Phvul.008G017300 2.0kb upstream 2.0kb upstream 6363 true Chr08: 1406655-1413017 Phaseolus vulgaris
Phvul.008G017300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1406655-1408654 Phaseolus vulgaris
Phvul.008G017300 2.0kb downstream 2.0kb downstream 6363 true Chr08: 1408655-1415017 Phaseolus vulgaris
Phvul.008G017300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1413018-1415017 Phaseolus vulgaris
Phvul.008G017300 5.0kb upstream 5.0kb upstream 9363 true Chr08: 1403655-1413017 Phaseolus vulgaris
Phvul.008G017300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1403655-1408654 Phaseolus vulgaris
Phvul.008G017300 5.0kb downstream 5.0kb downstream 9363 true Chr08: 1408655-1418017 Phaseolus vulgaris
Phvul.008G017300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1413018-1418017 Phaseolus vulgaris
Phvul.008G017300 10.0kb upstream 10.0kb upstream 14363 true Chr08: 1398655-1413017 Phaseolus vulgaris
Phvul.008G017300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1398655-1408654 Phaseolus vulgaris
Phvul.008G017300 10.0kb downstream 10.0kb downstream 14363 true Chr08: 1408655-1423017 Phaseolus vulgaris
Phvul.008G017300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1413018-1423017 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040993 5273 Angiosperm View MSA
122308224 5265 Fabidae View MSA
124066365 5270 Rosid View MSA
123739115 5271 Pentapetalae View MSA
122786806 5272 Eudicot View MSA
121344789 5274 Embryophyte View MSA
123428209 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.0358 0.0 116.847 High  
cufflinks 47.0718 0.0 122.154 High  
cufflinks 38.6535 0.0 100.0 High  
cufflinks 64.5735 0.0 169.389 High High
cufflinks 32.7617 0.0 84.7288 High  
cufflinks 30.9837 0.0 80.1315    
cufflinks 32.1924 0.0 83.2301 High  
cufflinks 39.5125 0.0 102.234 High  
cufflinks 39.2832 0.0 101.584 High  
cufflinks 29.5511 0.0 76.4828   Low
cufflinks 35.8257 0.0 92.6032 High  

0 Strain