Gene : Phvul.008G023400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR33228:SF3 - PROTEIN GLUTAMINE DUMPER 7 Genomic Order:  240
Name:  ? Phvul.008G023400 Secondary Identifier:  ? PAC:37160026
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G023400 0.5kb upstream 0.5kb upstream 1418 true Chr08: 1943641-1945058 Phaseolus vulgaris
Phvul.008G023400 0.5kb upstream 0.5kb upstream 500 false Chr08: 1943641-1944140 Phaseolus vulgaris
Phvul.008G023400 0.5kb downstream 0.5kb downstream 1418 true Chr08: 1944141-1945558 Phaseolus vulgaris
Phvul.008G023400 0.5kb downstream 0.5kb downstream 500 false Chr08: 1945059-1945558 Phaseolus vulgaris
Phvul.008G023400 1.0kb upstream 1.0kb upstream 1918 true Chr08: 1943141-1945058 Phaseolus vulgaris
Phvul.008G023400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1943141-1944140 Phaseolus vulgaris
Phvul.008G023400 1.0kb downstream 1.0kb downstream 1918 true Chr08: 1944141-1946058 Phaseolus vulgaris
Phvul.008G023400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1945059-1946058 Phaseolus vulgaris
Phvul.008G023400 2.0kb upstream 2.0kb upstream 2918 true Chr08: 1942141-1945058 Phaseolus vulgaris
Phvul.008G023400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1942141-1944140 Phaseolus vulgaris
Phvul.008G023400 2.0kb downstream 2.0kb downstream 2918 true Chr08: 1944141-1947058 Phaseolus vulgaris
Phvul.008G023400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1945059-1947058 Phaseolus vulgaris
Phvul.008G023400 5.0kb upstream 5.0kb upstream 5918 true Chr08: 1939141-1945058 Phaseolus vulgaris
Phvul.008G023400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1939141-1944140 Phaseolus vulgaris
Phvul.008G023400 5.0kb downstream 5.0kb downstream 5918 true Chr08: 1944141-1950058 Phaseolus vulgaris
Phvul.008G023400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1945059-1950058 Phaseolus vulgaris
Phvul.008G023400 10.0kb upstream 10.0kb upstream 10918 true Chr08: 1934141-1945058 Phaseolus vulgaris
Phvul.008G023400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1934141-1944140 Phaseolus vulgaris
Phvul.008G023400 10.0kb downstream 10.0kb downstream 10918 true Chr08: 1944141-1955058 Phaseolus vulgaris
Phvul.008G023400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1945059-1955058 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313286 5265 Fabidae View MSA
124071582 5270 Rosid View MSA
123752792 5271 Pentapetalae View MSA
122796809 5272 Eudicot View MSA
122048439 5273 Angiosperm View MSA
121310974 5274 Embryophyte View MSA
123348338 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.06081 0.0 10.3505    
cufflinks 2.159 0.0 7.58317    
cufflinks 0.252792 0.0 1.06139 Low Low
cufflinks 33.4437 0.0 88.2308   High
cufflinks 1.82359 0.0 6.52687    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.700115 0.0 2.70849    
cufflinks 0.278239 0.0 1.15766 Low  
cufflinks 4.18205 0.0 13.571    
cufflinks 0.542213 0.0 2.14453    
cufflinks 0.301445 0.0 1.25138 Low  

0 Strain