Gene : Phvul.008G022950 P. vulgaris v2.1
Defline:  (1 of 4) K14820 - ribosome biogenesis protein BRX1 (BRX1, BRIX1) Genomic Order:  234
Name:  ? Phvul.008G022950 Secondary Identifier:  ? PAC:37160917
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G022950 0.5kb upstream 0.5kb upstream 4422 true Chr08: 1900714-1905135 Phaseolus vulgaris
Phvul.008G022950 0.5kb upstream 0.5kb upstream 500 false Chr08: 1900714-1901213 Phaseolus vulgaris
Phvul.008G022950 0.5kb downstream 0.5kb downstream 4422 true Chr08: 1901214-1905635 Phaseolus vulgaris
Phvul.008G022950 0.5kb downstream 0.5kb downstream 500 false Chr08: 1905136-1905635 Phaseolus vulgaris
Phvul.008G022950 1.0kb upstream 1.0kb upstream 4922 true Chr08: 1900214-1905135 Phaseolus vulgaris
Phvul.008G022950 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1900214-1901213 Phaseolus vulgaris
Phvul.008G022950 1.0kb downstream 1.0kb downstream 4922 true Chr08: 1901214-1906135 Phaseolus vulgaris
Phvul.008G022950 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1905136-1906135 Phaseolus vulgaris
Phvul.008G022950 2.0kb upstream 2.0kb upstream 5922 true Chr08: 1899214-1905135 Phaseolus vulgaris
Phvul.008G022950 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1899214-1901213 Phaseolus vulgaris
Phvul.008G022950 2.0kb downstream 2.0kb downstream 5922 true Chr08: 1901214-1907135 Phaseolus vulgaris
Phvul.008G022950 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1905136-1907135 Phaseolus vulgaris
Phvul.008G022950 5.0kb upstream 5.0kb upstream 8922 true Chr08: 1896214-1905135 Phaseolus vulgaris
Phvul.008G022950 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1896214-1901213 Phaseolus vulgaris
Phvul.008G022950 5.0kb downstream 5.0kb downstream 8922 true Chr08: 1901214-1910135 Phaseolus vulgaris
Phvul.008G022950 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1905136-1910135 Phaseolus vulgaris
Phvul.008G022950 10.0kb upstream 10.0kb upstream 13922 true Chr08: 1891214-1905135 Phaseolus vulgaris
Phvul.008G022950 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1891214-1901213 Phaseolus vulgaris
Phvul.008G022950 10.0kb downstream 10.0kb downstream 13922 true Chr08: 1901214-1915135 Phaseolus vulgaris
Phvul.008G022950 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1905136-1915135 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301161 5265 Fabidae View MSA
124066566 5270 Rosid View MSA
123743226 5271 Pentapetalae View MSA
122791953 5272 Eudicot View MSA
122044943 5273 Angiosperm View MSA
121349152 5274 Embryophyte View MSA
123424371 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.07715 0.0 25.3964    
cufflinks 11.658 0.0 31.9417   High
cufflinks 3.77282 0.0 11.5794   Low
cufflinks 7.82547 0.0 22.4143    
cufflinks 7.15545 0.0 20.6711    
cufflinks 3.71655 0.0 11.4448   Low
cufflinks 9.26633 0.0 25.8592    
cufflinks 10.9462 0.0 29.9666    
cufflinks 10.6425 0.0 29.417    
cufflinks 3.27296 0.0 10.2672   Low
cufflinks 6.18524 0.0 18.0944    

0 Strain