Gene : Phvul.008G022300 P. vulgaris v2.1
Defline:  (1 of 8) PTHR34191:SF2 - STRESS-INDUCED PROTEIN KIN1-RELATED Genomic Order:  226
Name:  ? Phvul.008G022300 Secondary Identifier:  ? PAC:37158630
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G022300 0.5kb upstream 0.5kb upstream 1662 true Chr08: 1846541-1848202 Phaseolus vulgaris
Phvul.008G022300 0.5kb upstream 0.5kb upstream 500 false Chr08: 1846541-1847040 Phaseolus vulgaris
Phvul.008G022300 0.5kb downstream 0.5kb downstream 1662 true Chr08: 1847041-1848702 Phaseolus vulgaris
Phvul.008G022300 0.5kb downstream 0.5kb downstream 500 false Chr08: 1848203-1848702 Phaseolus vulgaris
Phvul.008G022300 1.0kb upstream 1.0kb upstream 2162 true Chr08: 1846041-1848202 Phaseolus vulgaris
Phvul.008G022300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1846041-1847040 Phaseolus vulgaris
Phvul.008G022300 1.0kb downstream 1.0kb downstream 2162 true Chr08: 1847041-1849202 Phaseolus vulgaris
Phvul.008G022300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1848203-1849202 Phaseolus vulgaris
Phvul.008G022300 2.0kb upstream 2.0kb upstream 3162 true Chr08: 1845041-1848202 Phaseolus vulgaris
Phvul.008G022300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1845041-1847040 Phaseolus vulgaris
Phvul.008G022300 2.0kb downstream 2.0kb downstream 3162 true Chr08: 1847041-1850202 Phaseolus vulgaris
Phvul.008G022300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1848203-1850202 Phaseolus vulgaris
Phvul.008G022300 5.0kb upstream 5.0kb upstream 6162 true Chr08: 1842041-1848202 Phaseolus vulgaris
Phvul.008G022300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1842041-1847040 Phaseolus vulgaris
Phvul.008G022300 5.0kb downstream 5.0kb downstream 6162 true Chr08: 1847041-1853202 Phaseolus vulgaris
Phvul.008G022300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1848203-1853202 Phaseolus vulgaris
Phvul.008G022300 10.0kb upstream 10.0kb upstream 11162 true Chr08: 1837041-1848202 Phaseolus vulgaris
Phvul.008G022300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1837041-1847040 Phaseolus vulgaris
Phvul.008G022300 10.0kb downstream 10.0kb downstream 11162 true Chr08: 1847041-1858202 Phaseolus vulgaris
Phvul.008G022300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1848203-1858202 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315337 5265 Fabidae View MSA
124073264 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.231912 0.0 1.14935 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 15.3686 0.0 51.1422   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.230946 0.0 1.14573 Low  

0 Strain