Gene : Phvul.008G025600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31741:SF17 - O-FUCOSYLTRANSFERASE-LIKE PROTEIN Genomic Order:  262
Name:  ? Phvul.008G025600 Secondary Identifier:  ? PAC:37160104
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G025600 0.5kb upstream 0.5kb upstream 4025 true Chr08: 2105255-2109279 Phaseolus vulgaris
Phvul.008G025600 0.5kb upstream 0.5kb upstream 500 false Chr08: 2108780-2109279 Phaseolus vulgaris
Phvul.008G025600 0.5kb downstream 0.5kb downstream 4025 true Chr08: 2104755-2108779 Phaseolus vulgaris
Phvul.008G025600 0.5kb downstream 0.5kb downstream 500 false Chr08: 2104755-2105254 Phaseolus vulgaris
Phvul.008G025600 1.0kb upstream 1.0kb upstream 4525 true Chr08: 2105255-2109779 Phaseolus vulgaris
Phvul.008G025600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2108780-2109779 Phaseolus vulgaris
Phvul.008G025600 1.0kb downstream 1.0kb downstream 4525 true Chr08: 2104255-2108779 Phaseolus vulgaris
Phvul.008G025600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2104255-2105254 Phaseolus vulgaris
Phvul.008G025600 2.0kb upstream 2.0kb upstream 5525 true Chr08: 2105255-2110779 Phaseolus vulgaris
Phvul.008G025600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2108780-2110779 Phaseolus vulgaris
Phvul.008G025600 2.0kb downstream 2.0kb downstream 5525 true Chr08: 2103255-2108779 Phaseolus vulgaris
Phvul.008G025600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2103255-2105254 Phaseolus vulgaris
Phvul.008G025600 5.0kb upstream 5.0kb upstream 8525 true Chr08: 2105255-2113779 Phaseolus vulgaris
Phvul.008G025600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2108780-2113779 Phaseolus vulgaris
Phvul.008G025600 5.0kb downstream 5.0kb downstream 8525 true Chr08: 2100255-2108779 Phaseolus vulgaris
Phvul.008G025600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2100255-2105254 Phaseolus vulgaris
Phvul.008G025600 10.0kb upstream 10.0kb upstream 13525 true Chr08: 2105255-2118779 Phaseolus vulgaris
Phvul.008G025600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2108780-2118779 Phaseolus vulgaris
Phvul.008G025600 10.0kb downstream 10.0kb downstream 13525 true Chr08: 2095255-2108779 Phaseolus vulgaris
Phvul.008G025600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2095255-2105254 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255172 5265 Fabidae View MSA
124069771 5270 Rosid View MSA
123749174 5271 Pentapetalae View MSA
122786787 5272 Eudicot View MSA
122050382 5273 Angiosperm View MSA
121348832 5274 Embryophyte View MSA
123381034 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.234762 0.0 0.905673 Low Low
cufflinks 1.8951 0.0 5.92942    
cufflinks 5.79476 0.0 16.0154   High
cufflinks 0.252856 0.0 0.97734 Low  
cufflinks 1.02854 0.0 3.48441    
cufflinks 3.94302 0.0 11.3279   High
cufflinks 1.36622 0.0 4.43872    
cufflinks 1.04014 0.0 3.46266    
cufflinks 1.01198 0.0 3.41194    
cufflinks 0.0572146 0.0 0.248303 Low Low
cufflinks 1.93482 0.0 6.08335    

0 Strain