Gene : Phvul.008G025500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 Genomic Order:  261
Name:  ? Phvul.008G025500 Secondary Identifier:  ? PAC:37158273
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G025500 0.5kb upstream 0.5kb upstream 4400 true Chr08: 2093819-2098218 Phaseolus vulgaris
Phvul.008G025500 0.5kb upstream 0.5kb upstream 500 false Chr08: 2097719-2098218 Phaseolus vulgaris
Phvul.008G025500 0.5kb downstream 0.5kb downstream 4400 true Chr08: 2093319-2097718 Phaseolus vulgaris
Phvul.008G025500 0.5kb downstream 0.5kb downstream 500 false Chr08: 2093319-2093818 Phaseolus vulgaris
Phvul.008G025500 1.0kb upstream 1.0kb upstream 4900 true Chr08: 2093819-2098718 Phaseolus vulgaris
Phvul.008G025500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2097719-2098718 Phaseolus vulgaris
Phvul.008G025500 1.0kb downstream 1.0kb downstream 4900 true Chr08: 2092819-2097718 Phaseolus vulgaris
Phvul.008G025500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2092819-2093818 Phaseolus vulgaris
Phvul.008G025500 2.0kb upstream 2.0kb upstream 5900 true Chr08: 2093819-2099718 Phaseolus vulgaris
Phvul.008G025500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2097719-2099718 Phaseolus vulgaris
Phvul.008G025500 2.0kb downstream 2.0kb downstream 5900 true Chr08: 2091819-2097718 Phaseolus vulgaris
Phvul.008G025500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2091819-2093818 Phaseolus vulgaris
Phvul.008G025500 5.0kb upstream 5.0kb upstream 8900 true Chr08: 2093819-2102718 Phaseolus vulgaris
Phvul.008G025500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2097719-2102718 Phaseolus vulgaris
Phvul.008G025500 5.0kb downstream 5.0kb downstream 8900 true Chr08: 2088819-2097718 Phaseolus vulgaris
Phvul.008G025500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2088819-2093818 Phaseolus vulgaris
Phvul.008G025500 10.0kb upstream 10.0kb upstream 13900 true Chr08: 2093819-2107718 Phaseolus vulgaris
Phvul.008G025500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2097719-2107718 Phaseolus vulgaris
Phvul.008G025500 10.0kb downstream 10.0kb downstream 13900 true Chr08: 2083819-2097718 Phaseolus vulgaris
Phvul.008G025500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2083819-2093818 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300056 5265 Fabidae View MSA
124070966 5270 Rosid View MSA
123742904 5271 Pentapetalae View MSA
122797269 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.51366 0.0 16.0406    
cufflinks 4.86793 0.0 14.3644    
cufflinks 5.47509 0.0 15.9114    
cufflinks 8.28872 0.0 23.2892   High
cufflinks 4.8134 0.0 14.3686    
cufflinks 5.07634 0.0 14.896    
cufflinks 5.11901 0.0 14.9937    
cufflinks 8.12541 0.0 22.6397   High
cufflinks 4.52769 0.0 13.4739    
cufflinks 5.0117 0.0 14.776    
cufflinks 5.21034 0.0 15.3594    

0 Strain