Gene : Phvul.008G008500 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10165:SF80 - LIPID PHOSPHATE PHOSPHATASE 1-RELATED Genomic Order:  85
Name:  ? Phvul.008G008500 Secondary Identifier:  ? PAC:37161061
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris TRIGLSYN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G008500 0.5kb upstream 0.5kb upstream 4496 true Chr08: 753791-758286 Phaseolus vulgaris
Phvul.008G008500 0.5kb upstream 0.5kb upstream 500 false Chr08: 753791-754290 Phaseolus vulgaris
Phvul.008G008500 0.5kb downstream 0.5kb downstream 4496 true Chr08: 754291-758786 Phaseolus vulgaris
Phvul.008G008500 0.5kb downstream 0.5kb downstream 500 false Chr08: 758287-758786 Phaseolus vulgaris
Phvul.008G008500 1.0kb upstream 1.0kb upstream 4996 true Chr08: 753291-758286 Phaseolus vulgaris
Phvul.008G008500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 753291-754290 Phaseolus vulgaris
Phvul.008G008500 1.0kb downstream 1.0kb downstream 4996 true Chr08: 754291-759286 Phaseolus vulgaris
Phvul.008G008500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 758287-759286 Phaseolus vulgaris
Phvul.008G008500 2.0kb upstream 2.0kb upstream 5996 true Chr08: 752291-758286 Phaseolus vulgaris
Phvul.008G008500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 752291-754290 Phaseolus vulgaris
Phvul.008G008500 2.0kb downstream 2.0kb downstream 5996 true Chr08: 754291-760286 Phaseolus vulgaris
Phvul.008G008500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 758287-760286 Phaseolus vulgaris
Phvul.008G008500 5.0kb upstream 5.0kb upstream 8996 true Chr08: 749291-758286 Phaseolus vulgaris
Phvul.008G008500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 749291-754290 Phaseolus vulgaris
Phvul.008G008500 5.0kb downstream 5.0kb downstream 8996 true Chr08: 754291-763286 Phaseolus vulgaris
Phvul.008G008500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 758287-763286 Phaseolus vulgaris
Phvul.008G008500 10.0kb upstream 10.0kb upstream 13996 true Chr08: 744291-758286 Phaseolus vulgaris
Phvul.008G008500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 744291-754290 Phaseolus vulgaris
Phvul.008G008500 10.0kb downstream 10.0kb downstream 13996 true Chr08: 754291-768286 Phaseolus vulgaris
Phvul.008G008500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 758287-768286 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314328 5265 Fabidae View MSA
124074068 5270 Rosid View MSA
123752776 5271 Pentapetalae View MSA
122787523 5272 Eudicot View MSA
122042575 5273 Angiosperm View MSA
121350600 5274 Embryophyte View MSA
123428329 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1501 0.0 48.0617    
cufflinks 7.11938 0.0 24.0988    
cufflinks 23.0498 0.0 73.6822   High
cufflinks 6.93283 0.0 23.9047    
cufflinks 9.42937 0.0 39.9576    
cufflinks 13.3272 0.0 52.1002    
cufflinks 7.79206 0.0 31.9585    
cufflinks 5.9047 0.0 24.3882    
cufflinks 5.15633 0.0 22.6246    
cufflinks 3.496 0.0 16.9319   Low
cufflinks 9.90909 0.0 31.8014    

0 Strain