Gene : Phvul.008G009300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12843:SF5 - METHYLTRANSFERASE-LIKE PROTEIN 10 Genomic Order:  93
Name:  ? Phvul.008G009300 Secondary Identifier:  ? PAC:37158202
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G009300 0.5kb upstream 0.5kb upstream 4988 true Chr08: 824810-829797 Phaseolus vulgaris
Phvul.008G009300 0.5kb upstream 0.5kb upstream 500 false Chr08: 824810-825309 Phaseolus vulgaris
Phvul.008G009300 0.5kb downstream 0.5kb downstream 4988 true Chr08: 825310-830297 Phaseolus vulgaris
Phvul.008G009300 0.5kb downstream 0.5kb downstream 500 false Chr08: 829798-830297 Phaseolus vulgaris
Phvul.008G009300 1.0kb upstream 1.0kb upstream 5488 true Chr08: 824310-829797 Phaseolus vulgaris
Phvul.008G009300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 824310-825309 Phaseolus vulgaris
Phvul.008G009300 1.0kb downstream 1.0kb downstream 5488 true Chr08: 825310-830797 Phaseolus vulgaris
Phvul.008G009300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 829798-830797 Phaseolus vulgaris
Phvul.008G009300 2.0kb upstream 2.0kb upstream 6488 true Chr08: 823310-829797 Phaseolus vulgaris
Phvul.008G009300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 823310-825309 Phaseolus vulgaris
Phvul.008G009300 2.0kb downstream 2.0kb downstream 6488 true Chr08: 825310-831797 Phaseolus vulgaris
Phvul.008G009300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 829798-831797 Phaseolus vulgaris
Phvul.008G009300 5.0kb upstream 5.0kb upstream 9488 true Chr08: 820310-829797 Phaseolus vulgaris
Phvul.008G009300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 820310-825309 Phaseolus vulgaris
Phvul.008G009300 5.0kb downstream 5.0kb downstream 9488 true Chr08: 825310-834797 Phaseolus vulgaris
Phvul.008G009300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 829798-834797 Phaseolus vulgaris
Phvul.008G009300 10.0kb upstream 10.0kb upstream 14488 true Chr08: 815310-829797 Phaseolus vulgaris
Phvul.008G009300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 815310-825309 Phaseolus vulgaris
Phvul.008G009300 10.0kb downstream 10.0kb downstream 14488 true Chr08: 825310-839797 Phaseolus vulgaris
Phvul.008G009300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 829798-839797 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308829 5265 Fabidae View MSA
124065361 5270 Rosid View MSA
123737741 5271 Pentapetalae View MSA
122789553 5272 Eudicot View MSA
122041744 5273 Angiosperm View MSA
121347606 5274 Embryophyte View MSA
123380579 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.7493 0.0 56.6014    
cufflinks 23.0273 0.0 59.8778    
cufflinks 12.6988 0.0 34.2378   Low
cufflinks 25.7645 0.0 66.7856    
cufflinks 23.2801 0.0 60.4645    
cufflinks 18.4632 0.0 48.5141    
cufflinks 20.2266 0.0 52.8398    
cufflinks 17.1326 0.0 45.2074    
cufflinks 28.1221 0.0 72.7849   High
cufflinks 26.8479 0.0 69.5205    
cufflinks 27.2933 0.0 70.6611    

0 Strain