Gene : Phvul.008G012200 P. vulgaris v2.1
Defline:  (1 of 39) PF04535 - Domain of unknown function (DUF588) (DUF588) Genomic Order:  122
Name:  ? Phvul.008G012200 Secondary Identifier:  ? PAC:37160187
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G012200 0.5kb upstream 0.5kb upstream 2201 true Chr08: 1009781-1011981 Phaseolus vulgaris
Phvul.008G012200 0.5kb upstream 0.5kb upstream 500 false Chr08: 1011482-1011981 Phaseolus vulgaris
Phvul.008G012200 0.5kb downstream 0.5kb downstream 2201 true Chr08: 1009281-1011481 Phaseolus vulgaris
Phvul.008G012200 0.5kb downstream 0.5kb downstream 500 false Chr08: 1009281-1009780 Phaseolus vulgaris
Phvul.008G012200 1.0kb upstream 1.0kb upstream 2701 true Chr08: 1009781-1012481 Phaseolus vulgaris
Phvul.008G012200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1011482-1012481 Phaseolus vulgaris
Phvul.008G012200 1.0kb downstream 1.0kb downstream 2701 true Chr08: 1008781-1011481 Phaseolus vulgaris
Phvul.008G012200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1008781-1009780 Phaseolus vulgaris
Phvul.008G012200 2.0kb upstream 2.0kb upstream 3701 true Chr08: 1009781-1013481 Phaseolus vulgaris
Phvul.008G012200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1011482-1013481 Phaseolus vulgaris
Phvul.008G012200 2.0kb downstream 2.0kb downstream 3701 true Chr08: 1007781-1011481 Phaseolus vulgaris
Phvul.008G012200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1007781-1009780 Phaseolus vulgaris
Phvul.008G012200 5.0kb upstream 5.0kb upstream 6701 true Chr08: 1009781-1016481 Phaseolus vulgaris
Phvul.008G012200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1011482-1016481 Phaseolus vulgaris
Phvul.008G012200 5.0kb downstream 5.0kb downstream 6701 true Chr08: 1004781-1011481 Phaseolus vulgaris
Phvul.008G012200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1004781-1009780 Phaseolus vulgaris
Phvul.008G012200 10.0kb upstream 10.0kb upstream 11701 true Chr08: 1009781-1021481 Phaseolus vulgaris
Phvul.008G012200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1011482-1021481 Phaseolus vulgaris
Phvul.008G012200 10.0kb downstream 10.0kb downstream 11701 true Chr08: 999781-1011481 Phaseolus vulgaris
Phvul.008G012200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 999781-1009780 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305983 5265 Fabidae View MSA
124069880 5270 Rosid View MSA
123750880 5271 Pentapetalae View MSA
122792969 5272 Eudicot View MSA
122047644 5273 Angiosperm View MSA
121351377 5274 Embryophyte View MSA
123382143 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.12688 0.0 7.87122   High
cufflinks 0.0813102 0.0 0.406114 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.449745 0.0 1.89039 Low  
cufflinks 0.0985343 0.0 0.482574 Low  
cufflinks 0.21605 0.0 0.973068 Low  
cufflinks 0.21536 0.0 0.973103 Low  
cufflinks 0.0465784 0.0 0.249143 Low Low
cufflinks 0.0908127 0.0 0.450526 Low  

0 Strain