Gene : Phvul.008G012300 P. vulgaris v2.1
Defline:  (1 of 39) PF04535 - Domain of unknown function (DUF588) (DUF588) Genomic Order:  123
Name:  ? Phvul.008G012300 Secondary Identifier:  ? PAC:37161518
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G012300 0.5kb upstream 0.5kb upstream 4761 true Chr08: 1017687-1022447 Phaseolus vulgaris
Phvul.008G012300 0.5kb upstream 0.5kb upstream 500 false Chr08: 1021948-1022447 Phaseolus vulgaris
Phvul.008G012300 0.5kb downstream 0.5kb downstream 4761 true Chr08: 1017187-1021947 Phaseolus vulgaris
Phvul.008G012300 0.5kb downstream 0.5kb downstream 500 false Chr08: 1017187-1017686 Phaseolus vulgaris
Phvul.008G012300 1.0kb upstream 1.0kb upstream 5261 true Chr08: 1017687-1022947 Phaseolus vulgaris
Phvul.008G012300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1021948-1022947 Phaseolus vulgaris
Phvul.008G012300 1.0kb downstream 1.0kb downstream 5261 true Chr08: 1016687-1021947 Phaseolus vulgaris
Phvul.008G012300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1016687-1017686 Phaseolus vulgaris
Phvul.008G012300 2.0kb upstream 2.0kb upstream 6261 true Chr08: 1017687-1023947 Phaseolus vulgaris
Phvul.008G012300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1021948-1023947 Phaseolus vulgaris
Phvul.008G012300 2.0kb downstream 2.0kb downstream 6261 true Chr08: 1015687-1021947 Phaseolus vulgaris
Phvul.008G012300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1015687-1017686 Phaseolus vulgaris
Phvul.008G012300 5.0kb upstream 5.0kb upstream 9261 true Chr08: 1017687-1026947 Phaseolus vulgaris
Phvul.008G012300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1021948-1026947 Phaseolus vulgaris
Phvul.008G012300 5.0kb downstream 5.0kb downstream 9261 true Chr08: 1012687-1021947 Phaseolus vulgaris
Phvul.008G012300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1012687-1017686 Phaseolus vulgaris
Phvul.008G012300 10.0kb upstream 10.0kb upstream 14261 true Chr08: 1017687-1031947 Phaseolus vulgaris
Phvul.008G012300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1021948-1031947 Phaseolus vulgaris
Phvul.008G012300 10.0kb downstream 10.0kb downstream 14261 true Chr08: 1007687-1021947 Phaseolus vulgaris
Phvul.008G012300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1007687-1017686 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305983 5265 Fabidae View MSA
124069880 5270 Rosid View MSA
123750880 5271 Pentapetalae View MSA
122792969 5272 Eudicot View MSA
122047644 5273 Angiosperm View MSA
121351377 5274 Embryophyte View MSA
123382143 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.09974 0.0 13.8711    
cufflinks 0.329194 0.0 3.93705 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.451012 0.0 4.58758 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.16697 0.0 16.6903    
cufflinks 9.55751 0.0 37.9917   High
cufflinks 6.91566 0.0 26.7978    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain