Gene : Phvul.008G014800 P. vulgaris v2.1
Defline:  (1 of 135) PF00646 - F-box domain (F-box) Genomic Order:  149
Name:  ? Phvul.008G014800 Secondary Identifier:  ? PAC:37160222
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G014800 0.5kb upstream 0.5kb upstream 2670 true Chr08: 1215210-1217879 Phaseolus vulgaris
Phvul.008G014800 0.5kb upstream 0.5kb upstream 500 false Chr08: 1217380-1217879 Phaseolus vulgaris
Phvul.008G014800 0.5kb downstream 0.5kb downstream 2670 true Chr08: 1214710-1217379 Phaseolus vulgaris
Phvul.008G014800 0.5kb downstream 0.5kb downstream 500 false Chr08: 1214710-1215209 Phaseolus vulgaris
Phvul.008G014800 1.0kb upstream 1.0kb upstream 3170 true Chr08: 1215210-1218379 Phaseolus vulgaris
Phvul.008G014800 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1217380-1218379 Phaseolus vulgaris
Phvul.008G014800 1.0kb downstream 1.0kb downstream 3170 true Chr08: 1214210-1217379 Phaseolus vulgaris
Phvul.008G014800 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1214210-1215209 Phaseolus vulgaris
Phvul.008G014800 2.0kb upstream 2.0kb upstream 4170 true Chr08: 1215210-1219379 Phaseolus vulgaris
Phvul.008G014800 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1217380-1219379 Phaseolus vulgaris
Phvul.008G014800 2.0kb downstream 2.0kb downstream 4170 true Chr08: 1213210-1217379 Phaseolus vulgaris
Phvul.008G014800 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1213210-1215209 Phaseolus vulgaris
Phvul.008G014800 5.0kb upstream 5.0kb upstream 7170 true Chr08: 1215210-1222379 Phaseolus vulgaris
Phvul.008G014800 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1217380-1222379 Phaseolus vulgaris
Phvul.008G014800 5.0kb downstream 5.0kb downstream 7170 true Chr08: 1210210-1217379 Phaseolus vulgaris
Phvul.008G014800 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1210210-1215209 Phaseolus vulgaris
Phvul.008G014800 10.0kb upstream 10.0kb upstream 12170 true Chr08: 1215210-1227379 Phaseolus vulgaris
Phvul.008G014800 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1217380-1227379 Phaseolus vulgaris
Phvul.008G014800 10.0kb downstream 10.0kb downstream 12170 true Chr08: 1205210-1217379 Phaseolus vulgaris
Phvul.008G014800 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1205210-1215209 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309899 5265 Fabidae View MSA
124074285 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.24841 0.0 7.35342   High
cufflinks 0.500633 0.0 1.89819    
cufflinks 0.827222 0.0 2.9873    
cufflinks 0.428192 0.0 1.65505 Low  
cufflinks 0.19001 0.0 0.781994 Low Low
cufflinks 1.23422 0.0 4.31055    
cufflinks 0.653474 0.0 2.43217    
cufflinks 1.02855 0.0 3.64938    
cufflinks 0.0695746 0.0 0.314372 Low Low
cufflinks 1.01773 0.0 3.63269    
cufflinks 0.514267 0.0 1.95694 Low  

0 Strain