Gene : Phvul.008G016500 P. vulgaris v2.1
Defline:  (1 of 3) PF00612//PF02179 - IQ calmodulin-binding motif (IQ) // BAG domain (BAG) Genomic Order:  166
Name:  ? Phvul.008G016500 Secondary Identifier:  ? PAC:37159559
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G016500 0.5kb upstream 0.5kb upstream 1733 true Chr08: 1347005-1348737 Phaseolus vulgaris
Phvul.008G016500 0.5kb upstream 0.5kb upstream 500 false Chr08: 1347005-1347504 Phaseolus vulgaris
Phvul.008G016500 0.5kb downstream 0.5kb downstream 1733 true Chr08: 1347505-1349237 Phaseolus vulgaris
Phvul.008G016500 0.5kb downstream 0.5kb downstream 500 false Chr08: 1348738-1349237 Phaseolus vulgaris
Phvul.008G016500 1.0kb upstream 1.0kb upstream 2233 true Chr08: 1346505-1348737 Phaseolus vulgaris
Phvul.008G016500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1346505-1347504 Phaseolus vulgaris
Phvul.008G016500 1.0kb downstream 1.0kb downstream 2233 true Chr08: 1347505-1349737 Phaseolus vulgaris
Phvul.008G016500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1348738-1349737 Phaseolus vulgaris
Phvul.008G016500 2.0kb upstream 2.0kb upstream 3233 true Chr08: 1345505-1348737 Phaseolus vulgaris
Phvul.008G016500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1345505-1347504 Phaseolus vulgaris
Phvul.008G016500 2.0kb downstream 2.0kb downstream 3233 true Chr08: 1347505-1350737 Phaseolus vulgaris
Phvul.008G016500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1348738-1350737 Phaseolus vulgaris
Phvul.008G016500 5.0kb upstream 5.0kb upstream 6233 true Chr08: 1342505-1348737 Phaseolus vulgaris
Phvul.008G016500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1342505-1347504 Phaseolus vulgaris
Phvul.008G016500 5.0kb downstream 5.0kb downstream 6233 true Chr08: 1347505-1353737 Phaseolus vulgaris
Phvul.008G016500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1348738-1353737 Phaseolus vulgaris
Phvul.008G016500 10.0kb upstream 10.0kb upstream 11233 true Chr08: 1337505-1348737 Phaseolus vulgaris
Phvul.008G016500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1337505-1347504 Phaseolus vulgaris
Phvul.008G016500 10.0kb downstream 10.0kb downstream 11233 true Chr08: 1347505-1358737 Phaseolus vulgaris
Phvul.008G016500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1348738-1358737 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314255 5265 Fabidae View MSA
124071387 5270 Rosid View MSA
123745998 5271 Pentapetalae View MSA
122794745 5272 Eudicot View MSA
122048946 5273 Angiosperm View MSA
121350566 5274 Embryophyte View MSA
123381797 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.5777 0.0 48.0671   High
cufflinks 15.262 0.0 39.6151   High
cufflinks 0.662172 0.0 2.31884   Low
cufflinks 16.8538 0.0 43.9284   High
cufflinks 1.58029 0.0 5.08554    
cufflinks 1.04833 0.0 3.48506   Low
cufflinks 6.57556 0.0 17.8812    
cufflinks 18.3283 0.0 47.3894   High
cufflinks 3.52344 0.0 10.1796    
cufflinks 2.52083 0.0 7.67116    
cufflinks 2.36478 0.0 7.20175    

0 Strain