Gene : Phvul.008G015400 P. vulgaris v2.1
Defline:  (1 of 4) 3.2.1.52 - Beta-N-acetylhexosaminidase / N-acetyl-beta-glucosaminidase Genomic Order:  155
Name:  ? Phvul.008G015400 Secondary Identifier:  ? PAC:37160898
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6902 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G015400 0.5kb upstream 0.5kb upstream 8559 true Chr08: 1263928-1272486 Phaseolus vulgaris
Phvul.008G015400 0.5kb upstream 0.5kb upstream 500 false Chr08: 1271987-1272486 Phaseolus vulgaris
Phvul.008G015400 0.5kb downstream 0.5kb downstream 8559 true Chr08: 1263428-1271986 Phaseolus vulgaris
Phvul.008G015400 0.5kb downstream 0.5kb downstream 500 false Chr08: 1263428-1263927 Phaseolus vulgaris
Phvul.008G015400 1.0kb upstream 1.0kb upstream 9059 true Chr08: 1263928-1272986 Phaseolus vulgaris
Phvul.008G015400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1271987-1272986 Phaseolus vulgaris
Phvul.008G015400 1.0kb downstream 1.0kb downstream 9059 true Chr08: 1262928-1271986 Phaseolus vulgaris
Phvul.008G015400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1262928-1263927 Phaseolus vulgaris
Phvul.008G015400 2.0kb upstream 2.0kb upstream 10059 true Chr08: 1263928-1273986 Phaseolus vulgaris
Phvul.008G015400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1271987-1273986 Phaseolus vulgaris
Phvul.008G015400 2.0kb downstream 2.0kb downstream 10059 true Chr08: 1261928-1271986 Phaseolus vulgaris
Phvul.008G015400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1261928-1263927 Phaseolus vulgaris
Phvul.008G015400 5.0kb upstream 5.0kb upstream 13059 true Chr08: 1263928-1276986 Phaseolus vulgaris
Phvul.008G015400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1271987-1276986 Phaseolus vulgaris
Phvul.008G015400 5.0kb downstream 5.0kb downstream 13059 true Chr08: 1258928-1271986 Phaseolus vulgaris
Phvul.008G015400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1258928-1263927 Phaseolus vulgaris
Phvul.008G015400 10.0kb upstream 10.0kb upstream 18059 true Chr08: 1263928-1281986 Phaseolus vulgaris
Phvul.008G015400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1271987-1281986 Phaseolus vulgaris
Phvul.008G015400 10.0kb downstream 10.0kb downstream 18059 true Chr08: 1253928-1271986 Phaseolus vulgaris
Phvul.008G015400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1253928-1263927 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310908 5265 Fabidae View MSA
124068580 5270 Rosid View MSA
123738133 5271 Pentapetalae View MSA
122790534 5272 Eudicot View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.96793 0.0 26.5046   Low
cufflinks 22.8171 0.0 58.979   High
cufflinks 18.422 0.0 47.672    
cufflinks 21.5644 0.0 55.749   High
cufflinks 14.0451 0.0 36.7172    
cufflinks 14.4554 0.0 37.6715    
cufflinks 15.0175 0.0 39.0998    
cufflinks 14.3168 0.0 37.3023    
cufflinks 25.3791 0.0 65.6297   High
cufflinks 16.1089 0.0 41.8421    
cufflinks 13.0612 0.0 34.2652    

0 Strain