Gene : Phvul.008G015200 P. vulgaris v2.1
Defline:  (1 of 4) K02893 - large subunit ribosomal protein L23Ae (RP-L23Ae, RPL23A) Genomic Order:  153
Name:  ? Phvul.008G015200 Secondary Identifier:  ? PAC:37158718
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G015200 0.5kb upstream 0.5kb upstream 2151 true Chr08: 1243920-1246070 Phaseolus vulgaris
Phvul.008G015200 0.5kb upstream 0.5kb upstream 500 false Chr08: 1245571-1246070 Phaseolus vulgaris
Phvul.008G015200 0.5kb downstream 0.5kb downstream 2151 true Chr08: 1243420-1245570 Phaseolus vulgaris
Phvul.008G015200 0.5kb downstream 0.5kb downstream 500 false Chr08: 1243420-1243919 Phaseolus vulgaris
Phvul.008G015200 1.0kb upstream 1.0kb upstream 2651 true Chr08: 1243920-1246570 Phaseolus vulgaris
Phvul.008G015200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 1245571-1246570 Phaseolus vulgaris
Phvul.008G015200 1.0kb downstream 1.0kb downstream 2651 true Chr08: 1242920-1245570 Phaseolus vulgaris
Phvul.008G015200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 1242920-1243919 Phaseolus vulgaris
Phvul.008G015200 2.0kb upstream 2.0kb upstream 3651 true Chr08: 1243920-1247570 Phaseolus vulgaris
Phvul.008G015200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 1245571-1247570 Phaseolus vulgaris
Phvul.008G015200 2.0kb downstream 2.0kb downstream 3651 true Chr08: 1241920-1245570 Phaseolus vulgaris
Phvul.008G015200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 1241920-1243919 Phaseolus vulgaris
Phvul.008G015200 5.0kb upstream 5.0kb upstream 6651 true Chr08: 1243920-1250570 Phaseolus vulgaris
Phvul.008G015200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 1245571-1250570 Phaseolus vulgaris
Phvul.008G015200 5.0kb downstream 5.0kb downstream 6651 true Chr08: 1238920-1245570 Phaseolus vulgaris
Phvul.008G015200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 1238920-1243919 Phaseolus vulgaris
Phvul.008G015200 10.0kb upstream 10.0kb upstream 11651 true Chr08: 1243920-1255570 Phaseolus vulgaris
Phvul.008G015200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 1245571-1255570 Phaseolus vulgaris
Phvul.008G015200 10.0kb downstream 10.0kb downstream 11651 true Chr08: 1233920-1245570 Phaseolus vulgaris
Phvul.008G015200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 1233920-1243919 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315036 5265 Fabidae View MSA
124072262 5270 Rosid View MSA
123746910 5271 Pentapetalae View MSA
122787789 5272 Eudicot View MSA
122048184 5273 Angiosperm View MSA
121343898 5274 Embryophyte View MSA
123423801 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.827 0.0 50.2693    
cufflinks 34.2074 0.0 91.2696 High High
cufflinks 13.5055 0.0 39.1248    
cufflinks 24.3187 0.0 66.9751    
cufflinks 15.8623 0.0 45.7634    
cufflinks 10.725 0.0 31.8819   Low
cufflinks 21.0321 0.0 58.3197    
cufflinks 30.0493 0.0 80.3819 High High
cufflinks 27.3994 0.0 74.3501    
cufflinks 6.75426 0.0 21.2829   Low
cufflinks 16.6413 0.0 47.5777    

0 Strain