Gene : Phvul.008G004600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23024:SF93 - CARBOXYLESTERASE 17-RELATED Genomic Order:  47
Name:  ? Phvul.008G004600 Secondary Identifier:  ? PAC:37159231
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6303 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G004600 0.5kb upstream 0.5kb upstream 2361 true Chr08: 421980-424340 Phaseolus vulgaris
Phvul.008G004600 0.5kb upstream 0.5kb upstream 500 false Chr08: 421980-422479 Phaseolus vulgaris
Phvul.008G004600 0.5kb downstream 0.5kb downstream 2361 true Chr08: 422480-424840 Phaseolus vulgaris
Phvul.008G004600 0.5kb downstream 0.5kb downstream 500 false Chr08: 424341-424840 Phaseolus vulgaris
Phvul.008G004600 1.0kb upstream 1.0kb upstream 2861 true Chr08: 421480-424340 Phaseolus vulgaris
Phvul.008G004600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 421480-422479 Phaseolus vulgaris
Phvul.008G004600 1.0kb downstream 1.0kb downstream 2861 true Chr08: 422480-425340 Phaseolus vulgaris
Phvul.008G004600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 424341-425340 Phaseolus vulgaris
Phvul.008G004600 2.0kb upstream 2.0kb upstream 3861 true Chr08: 420480-424340 Phaseolus vulgaris
Phvul.008G004600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 420480-422479 Phaseolus vulgaris
Phvul.008G004600 2.0kb downstream 2.0kb downstream 3861 true Chr08: 422480-426340 Phaseolus vulgaris
Phvul.008G004600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 424341-426340 Phaseolus vulgaris
Phvul.008G004600 5.0kb upstream 5.0kb upstream 6861 true Chr08: 417480-424340 Phaseolus vulgaris
Phvul.008G004600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 417480-422479 Phaseolus vulgaris
Phvul.008G004600 5.0kb downstream 5.0kb downstream 6861 true Chr08: 422480-429340 Phaseolus vulgaris
Phvul.008G004600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 424341-429340 Phaseolus vulgaris
Phvul.008G004600 10.0kb upstream 10.0kb upstream 11861 true Chr08: 412480-424340 Phaseolus vulgaris
Phvul.008G004600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 412480-422479 Phaseolus vulgaris
Phvul.008G004600 10.0kb downstream 10.0kb downstream 11861 true Chr08: 422480-434340 Phaseolus vulgaris
Phvul.008G004600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 424341-434340 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308327 5265 Fabidae View MSA
124065608 5270 Rosid View MSA
123745232 5271 Pentapetalae View MSA
122791893 5272 Eudicot View MSA
122051062 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350136 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.191475 0.0 0.76865 Low  
cufflinks 0.176475 0.0 0.71232 Low  
cufflinks 1.13734 0.0 3.89403    
cufflinks 0.353086 0.0 1.35216 Low  
cufflinks 0.397833 0.0 1.51182 Low  
cufflinks 0.0798457 0.0 0.344528 Low  
cufflinks 12.8609 0.0 34.2526   High
cufflinks 76.199 0.0 206.529 High High
cufflinks 0.0756499 0.0 0.328543 Low  
cufflinks 0.232233 0.0 0.918518 Low  
cufflinks 0.0653124 0.0 0.288961 Low  

0 Strain