Gene : Phvul.008G003600 P. vulgaris v2.1
Defline:  (1 of 3) K00616 - transaldolase (E2.2.1.2, talA, talB) Genomic Order:  37
Name:  ? Phvul.008G003600 Secondary Identifier:  ? PAC:37161152
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris NONOXIPENT-PWY Phaseolus vulgaris pathologic  
Pvulgaris PENTOSE-P-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-5723 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G003600 0.5kb upstream 0.5kb upstream 4213 true Chr08: 332410-336622 Phaseolus vulgaris
Phvul.008G003600 0.5kb upstream 0.5kb upstream 500 false Chr08: 336123-336622 Phaseolus vulgaris
Phvul.008G003600 0.5kb downstream 0.5kb downstream 4213 true Chr08: 331910-336122 Phaseolus vulgaris
Phvul.008G003600 0.5kb downstream 0.5kb downstream 500 false Chr08: 331910-332409 Phaseolus vulgaris
Phvul.008G003600 1.0kb upstream 1.0kb upstream 4713 true Chr08: 332410-337122 Phaseolus vulgaris
Phvul.008G003600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 336123-337122 Phaseolus vulgaris
Phvul.008G003600 1.0kb downstream 1.0kb downstream 4713 true Chr08: 331410-336122 Phaseolus vulgaris
Phvul.008G003600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 331410-332409 Phaseolus vulgaris
Phvul.008G003600 2.0kb upstream 2.0kb upstream 5713 true Chr08: 332410-338122 Phaseolus vulgaris
Phvul.008G003600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 336123-338122 Phaseolus vulgaris
Phvul.008G003600 2.0kb downstream 2.0kb downstream 5713 true Chr08: 330410-336122 Phaseolus vulgaris
Phvul.008G003600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 330410-332409 Phaseolus vulgaris
Phvul.008G003600 5.0kb upstream 5.0kb upstream 8713 true Chr08: 332410-341122 Phaseolus vulgaris
Phvul.008G003600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 336123-341122 Phaseolus vulgaris
Phvul.008G003600 5.0kb downstream 5.0kb downstream 8713 true Chr08: 327410-336122 Phaseolus vulgaris
Phvul.008G003600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 327410-332409 Phaseolus vulgaris
Phvul.008G003600 10.0kb upstream 10.0kb upstream 13713 true Chr08: 332410-346122 Phaseolus vulgaris
Phvul.008G003600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 336123-346122 Phaseolus vulgaris
Phvul.008G003600 10.0kb downstream 10.0kb downstream 13713 true Chr08: 322410-336122 Phaseolus vulgaris
Phvul.008G003600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 322410-332409 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303428 5265 Fabidae View MSA
124064365 5270 Rosid View MSA
123743559 5271 Pentapetalae View MSA
122786857 5272 Eudicot View MSA
122044911 5273 Angiosperm View MSA
121343866 5274 Embryophyte View MSA
123379934 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 225.424 0.0 1009.99 High  
cufflinks 113.514 0.0 386.021 High  
cufflinks 48.336 0.0 140.083 High Low
cufflinks 260.893 0.0 893.423 High High
cufflinks 189.32 0.0 577.014 High  
cufflinks 84.4809 0.0 269.275 High Low
cufflinks 139.054 0.0 501.16 High  
cufflinks 99.9234 0.0 330.894 High  
cufflinks 211.901 0.0 682.43 High  
cufflinks 206.788 0.0 895.185 High  
cufflinks 231.977 0.0 757.19 High  

0 Strain