Gene : Phvul.008G006500 P. vulgaris v2.1
Defline:  (1 of 1) K13155 - U11/U12 small nuclear ribonucleoprotein 35 kDa protein (SNRNP35) Genomic Order:  66
Name:  ? Phvul.008G006500 Secondary Identifier:  ? PAC:37159461
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G006500 0.5kb upstream 0.5kb upstream 6908 true Chr08: 621663-628570 Phaseolus vulgaris
Phvul.008G006500 0.5kb upstream 0.5kb upstream 500 false Chr08: 628071-628570 Phaseolus vulgaris
Phvul.008G006500 0.5kb downstream 0.5kb downstream 6908 true Chr08: 621163-628070 Phaseolus vulgaris
Phvul.008G006500 0.5kb downstream 0.5kb downstream 500 false Chr08: 621163-621662 Phaseolus vulgaris
Phvul.008G006500 1.0kb upstream 1.0kb upstream 7408 true Chr08: 621663-629070 Phaseolus vulgaris
Phvul.008G006500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 628071-629070 Phaseolus vulgaris
Phvul.008G006500 1.0kb downstream 1.0kb downstream 7408 true Chr08: 620663-628070 Phaseolus vulgaris
Phvul.008G006500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 620663-621662 Phaseolus vulgaris
Phvul.008G006500 2.0kb upstream 2.0kb upstream 8408 true Chr08: 621663-630070 Phaseolus vulgaris
Phvul.008G006500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 628071-630070 Phaseolus vulgaris
Phvul.008G006500 2.0kb downstream 2.0kb downstream 8408 true Chr08: 619663-628070 Phaseolus vulgaris
Phvul.008G006500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 619663-621662 Phaseolus vulgaris
Phvul.008G006500 5.0kb upstream 5.0kb upstream 11408 true Chr08: 621663-633070 Phaseolus vulgaris
Phvul.008G006500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 628071-633070 Phaseolus vulgaris
Phvul.008G006500 5.0kb downstream 5.0kb downstream 11408 true Chr08: 616663-628070 Phaseolus vulgaris
Phvul.008G006500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 616663-621662 Phaseolus vulgaris
Phvul.008G006500 10.0kb upstream 10.0kb upstream 16408 true Chr08: 621663-638070 Phaseolus vulgaris
Phvul.008G006500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 628071-638070 Phaseolus vulgaris
Phvul.008G006500 10.0kb downstream 10.0kb downstream 16408 true Chr08: 611663-628070 Phaseolus vulgaris
Phvul.008G006500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 611663-621662 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303279 5265 Fabidae View MSA
124062373 5270 Rosid View MSA
123739426 5271 Pentapetalae View MSA
122792874 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.34887 0.0 23.092    
cufflinks 6.37424 0.0 25.2477    
cufflinks 4.60818 0.0 21.2093    
cufflinks 5.92245 0.0 24.7519    
cufflinks 3.43248 0.0 19.1051   Low
cufflinks 3.69115 0.0 22.3535   Low
cufflinks 9.27408 0.0 41.8376   High
cufflinks 7.21067 0.0 26.2721    
cufflinks 7.54057 0.0 31.5462    
cufflinks 5.97989 0.0 26.4535    
cufflinks 4.89084 0.0 25.7549    

0 Strain