Gene : Phvul.009G259800 P. vulgaris v2.1
Defline:  (1 of 15) PF07714//PF13947 - Protein tyrosine kinase (Pkinase_Tyr) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Genomic Order:  2657
Name:  ? Phvul.009G259800 Secondary Identifier:  ? PAC:37150086
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G259800 0.5kb upstream 0.5kb upstream 3256 true Chr09: 37988295-37991550 Phaseolus vulgaris
Phvul.009G259800 0.5kb upstream 0.5kb upstream 500 false Chr09: 37988295-37988794 Phaseolus vulgaris
Phvul.009G259800 0.5kb downstream 0.5kb downstream 3256 true Chr09: 37988795-37992050 Phaseolus vulgaris
Phvul.009G259800 0.5kb downstream 0.5kb downstream 500 false Chr09: 37991551-37992050 Phaseolus vulgaris
Phvul.009G259800 1.0kb upstream 1.0kb upstream 3756 true Chr09: 37987795-37991550 Phaseolus vulgaris
Phvul.009G259800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37987795-37988794 Phaseolus vulgaris
Phvul.009G259800 1.0kb downstream 1.0kb downstream 3756 true Chr09: 37988795-37992550 Phaseolus vulgaris
Phvul.009G259800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37991551-37992550 Phaseolus vulgaris
Phvul.009G259800 2.0kb upstream 2.0kb upstream 4756 true Chr09: 37986795-37991550 Phaseolus vulgaris
Phvul.009G259800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37986795-37988794 Phaseolus vulgaris
Phvul.009G259800 2.0kb downstream 2.0kb downstream 4756 true Chr09: 37988795-37993550 Phaseolus vulgaris
Phvul.009G259800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37991551-37993550 Phaseolus vulgaris
Phvul.009G259800 5.0kb upstream 5.0kb upstream 7756 true Chr09: 37983795-37991550 Phaseolus vulgaris
Phvul.009G259800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37983795-37988794 Phaseolus vulgaris
Phvul.009G259800 5.0kb downstream 5.0kb downstream 7756 true Chr09: 37988795-37996550 Phaseolus vulgaris
Phvul.009G259800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37991551-37996550 Phaseolus vulgaris
Phvul.009G259800 10.0kb upstream 10.0kb upstream 12756 true Chr09: 37978795-37991550 Phaseolus vulgaris
Phvul.009G259800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37978795-37988794 Phaseolus vulgaris
Phvul.009G259800 10.0kb downstream 10.0kb downstream 12756 true Chr09: 37988795-38001550 Phaseolus vulgaris
Phvul.009G259800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37991551-38001550 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041477 5273 Angiosperm View MSA
122300813 5265 Fabidae View MSA
124070349 5270 Rosid View MSA
123737754 5271 Pentapetalae View MSA
122789456 5272 Eudicot View MSA
121309854 5274 Embryophyte View MSA
123347499 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.109455 0.0 0.448287 Low  
cufflinks 0.221865 0.0 0.860578 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.304995 0.0 1.15823 Low  
cufflinks 0.0271741 0.0 0.127598 Low Low
cufflinks 0.0609913 0.0 0.263173 Low  
cufflinks 0.443549 0.0 1.62632 Low High
cufflinks 0.2346 0.0 0.905588 Low  
cufflinks 0.700263 0.0 2.46317   High
cufflinks 0.0581469 0.0 0.252349 Low  
cufflinks 0.0328627 0.0 0.151405 Low Low

0 Strain