Gene : Phvul.009G260800 P. vulgaris v2.1
Defline:  (1 of 4) PTHR24093:SF355 - ATPASE 1, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  2667
Name:  ? Phvul.009G260800 Secondary Identifier:  ? PAC:37150560
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G260800 0.5kb upstream 0.5kb upstream 9653 true Chr09: 38071548-38081200 Phaseolus vulgaris
Phvul.009G260800 0.5kb upstream 0.5kb upstream 500 false Chr09: 38071548-38072047 Phaseolus vulgaris
Phvul.009G260800 0.5kb downstream 0.5kb downstream 9653 true Chr09: 38072048-38081700 Phaseolus vulgaris
Phvul.009G260800 0.5kb downstream 0.5kb downstream 500 false Chr09: 38081201-38081700 Phaseolus vulgaris
Phvul.009G260800 1.0kb upstream 1.0kb upstream 10153 true Chr09: 38071048-38081200 Phaseolus vulgaris
Phvul.009G260800 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38071048-38072047 Phaseolus vulgaris
Phvul.009G260800 1.0kb downstream 1.0kb downstream 10153 true Chr09: 38072048-38082200 Phaseolus vulgaris
Phvul.009G260800 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38081201-38082200 Phaseolus vulgaris
Phvul.009G260800 2.0kb upstream 2.0kb upstream 11153 true Chr09: 38070048-38081200 Phaseolus vulgaris
Phvul.009G260800 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38070048-38072047 Phaseolus vulgaris
Phvul.009G260800 2.0kb downstream 2.0kb downstream 11153 true Chr09: 38072048-38083200 Phaseolus vulgaris
Phvul.009G260800 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38081201-38083200 Phaseolus vulgaris
Phvul.009G260800 5.0kb upstream 5.0kb upstream 14153 true Chr09: 38067048-38081200 Phaseolus vulgaris
Phvul.009G260800 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38067048-38072047 Phaseolus vulgaris
Phvul.009G260800 5.0kb downstream 5.0kb downstream 14153 true Chr09: 38072048-38086200 Phaseolus vulgaris
Phvul.009G260800 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38081201-38086200 Phaseolus vulgaris
Phvul.009G260800 10.0kb upstream 10.0kb upstream 19153 true Chr09: 38062048-38081200 Phaseolus vulgaris
Phvul.009G260800 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38062048-38072047 Phaseolus vulgaris
Phvul.009G260800 10.0kb downstream 10.0kb downstream 19153 true Chr09: 38072048-38091200 Phaseolus vulgaris
Phvul.009G260800 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38081201-38091200 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305189 5265 Fabidae View MSA
124069030 5270 Rosid View MSA
123751017 5271 Pentapetalae View MSA
122796712 5272 Eudicot View MSA
122050656 5273 Angiosperm View MSA
121349531 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.91845 0.0 17.2018    
cufflinks 7.01189 0.0 23.2272   High
cufflinks 0.253172 0.0 1.17273 Low  
cufflinks 18.1372 0.0 63.3991   High
cufflinks 1.03143 0.0 3.56473    
cufflinks 0.29276 0.0 1.28738 Low  
cufflinks 0.41385 0.0 1.79847 Low  
cufflinks 0.172269 0.0 0.805572 Low Low
cufflinks 0.296522 0.0 1.33274 Low  
cufflinks 3.04426 0.0 11.8747    
cufflinks 1.91118 0.0 7.18639    

0 Strain