Gene : Phvul.009G260400 P. vulgaris v2.1
Defline:  (1 of 3) KOG4650 - Predicted steroid reductase Genomic Order:  2663
Name:  ? Phvul.009G260400 Secondary Identifier:  ? PAC:37148921
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G260400 0.5kb upstream 0.5kb upstream 2446 true Chr09: 38051652-38054097 Phaseolus vulgaris
Phvul.009G260400 0.5kb upstream 0.5kb upstream 500 false Chr09: 38053598-38054097 Phaseolus vulgaris
Phvul.009G260400 0.5kb downstream 0.5kb downstream 2446 true Chr09: 38051152-38053597 Phaseolus vulgaris
Phvul.009G260400 0.5kb downstream 0.5kb downstream 500 false Chr09: 38051152-38051651 Phaseolus vulgaris
Phvul.009G260400 1.0kb upstream 1.0kb upstream 2946 true Chr09: 38051652-38054597 Phaseolus vulgaris
Phvul.009G260400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38053598-38054597 Phaseolus vulgaris
Phvul.009G260400 1.0kb downstream 1.0kb downstream 2946 true Chr09: 38050652-38053597 Phaseolus vulgaris
Phvul.009G260400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38050652-38051651 Phaseolus vulgaris
Phvul.009G260400 2.0kb upstream 2.0kb upstream 3946 true Chr09: 38051652-38055597 Phaseolus vulgaris
Phvul.009G260400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38053598-38055597 Phaseolus vulgaris
Phvul.009G260400 2.0kb downstream 2.0kb downstream 3946 true Chr09: 38049652-38053597 Phaseolus vulgaris
Phvul.009G260400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38049652-38051651 Phaseolus vulgaris
Phvul.009G260400 5.0kb upstream 5.0kb upstream 6946 true Chr09: 38051652-38058597 Phaseolus vulgaris
Phvul.009G260400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38053598-38058597 Phaseolus vulgaris
Phvul.009G260400 5.0kb downstream 5.0kb downstream 6946 true Chr09: 38046652-38053597 Phaseolus vulgaris
Phvul.009G260400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38046652-38051651 Phaseolus vulgaris
Phvul.009G260400 10.0kb upstream 10.0kb upstream 11946 true Chr09: 38051652-38063597 Phaseolus vulgaris
Phvul.009G260400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38053598-38063597 Phaseolus vulgaris
Phvul.009G260400 10.0kb downstream 10.0kb downstream 11946 true Chr09: 38041652-38053597 Phaseolus vulgaris
Phvul.009G260400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38041652-38051651 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254022 5265 Fabidae View MSA
124062639 5270 Rosid View MSA
123740313 5271 Pentapetalae View MSA
122796551 5272 Eudicot View MSA
122046311 5273 Angiosperm View MSA
123429173 5275 Viridiplantae View MSA
121346898 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.82924 0.0 5.87068    
cufflinks 10.146 0.0 27.2303    
cufflinks 0.538865 0.0 1.96566 Low Low
cufflinks 1.07266 0.0 3.69119   Low
cufflinks 19.7456 0.0 51.2319   High
cufflinks 2.83432 0.0 8.63196    
cufflinks 9.77886 0.0 26.2793    
cufflinks 2.14208 0.0 6.70173    
cufflinks 6.8363 0.0 18.995    
cufflinks 4.38681 0.0 12.7329    
cufflinks 28.0178 0.0 72.4391   High

0 Strain