Gene : Phvul.009G261700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31707:SF55 - PECTINESTERASE 2-RELATED Genomic Order:  2676
Name:  ? Phvul.009G261700 Secondary Identifier:  ? PAC:37151754
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-1081 Phaseolus vulgaris pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G261700 0.5kb upstream 0.5kb upstream 3222 true Chr09: 38118061-38121282 Phaseolus vulgaris
Phvul.009G261700 0.5kb upstream 0.5kb upstream 500 false Chr09: 38118061-38118560 Phaseolus vulgaris
Phvul.009G261700 0.5kb downstream 0.5kb downstream 3222 true Chr09: 38118561-38121782 Phaseolus vulgaris
Phvul.009G261700 0.5kb downstream 0.5kb downstream 500 false Chr09: 38121283-38121782 Phaseolus vulgaris
Phvul.009G261700 1.0kb upstream 1.0kb upstream 3722 true Chr09: 38117561-38121282 Phaseolus vulgaris
Phvul.009G261700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38117561-38118560 Phaseolus vulgaris
Phvul.009G261700 1.0kb downstream 1.0kb downstream 3722 true Chr09: 38118561-38122282 Phaseolus vulgaris
Phvul.009G261700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38121283-38122282 Phaseolus vulgaris
Phvul.009G261700 2.0kb upstream 2.0kb upstream 4722 true Chr09: 38116561-38121282 Phaseolus vulgaris
Phvul.009G261700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38116561-38118560 Phaseolus vulgaris
Phvul.009G261700 2.0kb downstream 2.0kb downstream 4722 true Chr09: 38118561-38123282 Phaseolus vulgaris
Phvul.009G261700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38121283-38123282 Phaseolus vulgaris
Phvul.009G261700 5.0kb upstream 5.0kb upstream 7722 true Chr09: 38113561-38121282 Phaseolus vulgaris
Phvul.009G261700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38113561-38118560 Phaseolus vulgaris
Phvul.009G261700 5.0kb downstream 5.0kb downstream 7722 true Chr09: 38118561-38126282 Phaseolus vulgaris
Phvul.009G261700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38121283-38126282 Phaseolus vulgaris
Phvul.009G261700 10.0kb upstream 10.0kb upstream 12722 true Chr09: 38108561-38121282 Phaseolus vulgaris
Phvul.009G261700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38108561-38118560 Phaseolus vulgaris
Phvul.009G261700 10.0kb downstream 10.0kb downstream 12722 true Chr09: 38118561-38131282 Phaseolus vulgaris
Phvul.009G261700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38121283-38131282 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313065 5265 Fabidae View MSA
124060766 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.46185 0.0 22.4416    
cufflinks 63.2302 0.0 176.17 High High
cufflinks 51.7922 0.0 140.929 High  
cufflinks 7.66149 0.0 20.3385    
cufflinks 19.1731 0.0 49.5867    
cufflinks 74.1698 0.0 210.494 High High
cufflinks 1.29612 0.0 4.09675   Low
cufflinks 1.34218 0.0 4.26335   Low
cufflinks 0.447138 0.0 1.58673 Low Low
cufflinks 2.03025 0.0 6.17114    
cufflinks 51.381 0.0 140.672 High  

0 Strain