Gene : Phvul.009G263300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22792:SF52 - LA-RELATED PROTEIN 6B Genomic Order:  2692
Name:  ? Phvul.009G263300 Secondary Identifier:  ? PAC:37152146
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G263300 0.5kb upstream 0.5kb upstream 11088 true Chr09: 38224543-38235630 Phaseolus vulgaris
Phvul.009G263300 0.5kb upstream 0.5kb upstream 500 false Chr09: 38235131-38235630 Phaseolus vulgaris
Phvul.009G263300 0.5kb downstream 0.5kb downstream 11088 true Chr09: 38224043-38235130 Phaseolus vulgaris
Phvul.009G263300 0.5kb downstream 0.5kb downstream 500 false Chr09: 38224043-38224542 Phaseolus vulgaris
Phvul.009G263300 1.0kb upstream 1.0kb upstream 11588 true Chr09: 38224543-38236130 Phaseolus vulgaris
Phvul.009G263300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 38235131-38236130 Phaseolus vulgaris
Phvul.009G263300 1.0kb downstream 1.0kb downstream 11588 true Chr09: 38223543-38235130 Phaseolus vulgaris
Phvul.009G263300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 38223543-38224542 Phaseolus vulgaris
Phvul.009G263300 2.0kb upstream 2.0kb upstream 12588 true Chr09: 38224543-38237130 Phaseolus vulgaris
Phvul.009G263300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 38235131-38237130 Phaseolus vulgaris
Phvul.009G263300 2.0kb downstream 2.0kb downstream 12588 true Chr09: 38222543-38235130 Phaseolus vulgaris
Phvul.009G263300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 38222543-38224542 Phaseolus vulgaris
Phvul.009G263300 5.0kb upstream 5.0kb upstream 15588 true Chr09: 38224543-38240130 Phaseolus vulgaris
Phvul.009G263300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 38235131-38240130 Phaseolus vulgaris
Phvul.009G263300 5.0kb downstream 5.0kb downstream 15588 true Chr09: 38219543-38235130 Phaseolus vulgaris
Phvul.009G263300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 38219543-38224542 Phaseolus vulgaris
Phvul.009G263300 10.0kb upstream 10.0kb upstream 20588 true Chr09: 38224543-38245130 Phaseolus vulgaris
Phvul.009G263300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 38235131-38245130 Phaseolus vulgaris
Phvul.009G263300 10.0kb downstream 10.0kb downstream 20588 true Chr09: 38214543-38235130 Phaseolus vulgaris
Phvul.009G263300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 38214543-38224542 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301707 5265 Fabidae View MSA
124073936 5270 Rosid View MSA
123744284 5271 Pentapetalae View MSA
122790327 5272 Eudicot View MSA
122051197 5273 Angiosperm View MSA
121349510 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.2278 0.0 83.5348   Low
cufflinks 47.8734 0.0 126.068 High  
cufflinks 33.8798 0.0 87.9467    
cufflinks 38.8709 0.0 101.202 High  
cufflinks 58.4447 0.0 155.882 High High
cufflinks 34.6565 0.0 90.0054 High  
cufflinks 42.3225 0.0 111.085 High  
cufflinks 31.9943 0.0 83.0436 High Low
cufflinks 44.1449 0.0 115.954 High  
cufflinks 74.4944 0.0 202.902 High High
cufflinks 58.9336 0.0 157.337 High High

0 Strain