Gene : Phvul.008G035600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11638:SF121 - CHAPERONE PROTEIN CLPB3, CHLOROPLASTIC Genomic Order:  370
Name:  ? Phvul.008G035600 Secondary Identifier:  ? PAC:37159076
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.008G035600 0.5kb upstream 0.5kb upstream 7346 true Chr08: 2900141-2907486 Phaseolus vulgaris
Phvul.008G035600 0.5kb upstream 0.5kb upstream 500 false Chr08: 2900141-2900640 Phaseolus vulgaris
Phvul.008G035600 0.5kb downstream 0.5kb downstream 7346 true Chr08: 2900641-2907986 Phaseolus vulgaris
Phvul.008G035600 0.5kb downstream 0.5kb downstream 500 false Chr08: 2907487-2907986 Phaseolus vulgaris
Phvul.008G035600 1.0kb upstream 1.0kb upstream 7846 true Chr08: 2899641-2907486 Phaseolus vulgaris
Phvul.008G035600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2899641-2900640 Phaseolus vulgaris
Phvul.008G035600 1.0kb downstream 1.0kb downstream 7846 true Chr08: 2900641-2908486 Phaseolus vulgaris
Phvul.008G035600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2907487-2908486 Phaseolus vulgaris
Phvul.008G035600 2.0kb upstream 2.0kb upstream 8846 true Chr08: 2898641-2907486 Phaseolus vulgaris
Phvul.008G035600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2898641-2900640 Phaseolus vulgaris
Phvul.008G035600 2.0kb downstream 2.0kb downstream 8846 true Chr08: 2900641-2909486 Phaseolus vulgaris
Phvul.008G035600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2907487-2909486 Phaseolus vulgaris
Phvul.008G035600 5.0kb upstream 5.0kb upstream 11846 true Chr08: 2895641-2907486 Phaseolus vulgaris
Phvul.008G035600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2895641-2900640 Phaseolus vulgaris
Phvul.008G035600 5.0kb downstream 5.0kb downstream 11846 true Chr08: 2900641-2912486 Phaseolus vulgaris
Phvul.008G035600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2907487-2912486 Phaseolus vulgaris
Phvul.008G035600 10.0kb upstream 10.0kb upstream 16846 true Chr08: 2890641-2907486 Phaseolus vulgaris
Phvul.008G035600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2890641-2900640 Phaseolus vulgaris
Phvul.008G035600 10.0kb downstream 10.0kb downstream 16846 true Chr08: 2900641-2917486 Phaseolus vulgaris
Phvul.008G035600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2907487-2917486 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299690 5265 Fabidae View MSA
124062575 5270 Rosid View MSA
123743206 5271 Pentapetalae View MSA
122792663 5272 Eudicot View MSA
122044164 5273 Angiosperm View MSA
121345857 5274 Embryophyte View MSA
123426722 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7 0.0 30.2447    
cufflinks 17.4294 0.0 45.4328    
cufflinks 13.3067 0.0 34.4456    
cufflinks 17.1469 0.0 44.587    
cufflinks 16.07 0.0 41.6957    
cufflinks 12.2242 0.0 31.607    
cufflinks 7.29177 0.0 19.002   Low
cufflinks 8.45957 0.0 21.9325   Low
cufflinks 7.69431 0.0 20.0258   Low
cufflinks 30.0497 0.0 81.0822   High
cufflinks 17.8625 0.0 46.5403    

0 Strain