Gene : Phvul.009G248100 P. vulgaris v2.1
Defline:  (1 of 3) K08238 - xyloglucan 6-xylosyltransferase [EC:2.4.2.39] Xyl a1-6 Glc (XXT) Genomic Order:  2539
Name:  ? Phvul.009G248100 Secondary Identifier:  ? PAC:37151824
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5936 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G248100 0.5kb upstream 0.5kb upstream 1859 true Chr09: 36865282-36867140 Phaseolus vulgaris
Phvul.009G248100 0.5kb upstream 0.5kb upstream 500 false Chr09: 36866641-36867140 Phaseolus vulgaris
Phvul.009G248100 0.5kb downstream 0.5kb downstream 1859 true Chr09: 36864782-36866640 Phaseolus vulgaris
Phvul.009G248100 0.5kb downstream 0.5kb downstream 500 false Chr09: 36864782-36865281 Phaseolus vulgaris
Phvul.009G248100 1.0kb upstream 1.0kb upstream 2359 true Chr09: 36865282-36867640 Phaseolus vulgaris
Phvul.009G248100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 36866641-36867640 Phaseolus vulgaris
Phvul.009G248100 1.0kb downstream 1.0kb downstream 2359 true Chr09: 36864282-36866640 Phaseolus vulgaris
Phvul.009G248100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 36864282-36865281 Phaseolus vulgaris
Phvul.009G248100 2.0kb upstream 2.0kb upstream 3359 true Chr09: 36865282-36868640 Phaseolus vulgaris
Phvul.009G248100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 36866641-36868640 Phaseolus vulgaris
Phvul.009G248100 2.0kb downstream 2.0kb downstream 3359 true Chr09: 36863282-36866640 Phaseolus vulgaris
Phvul.009G248100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 36863282-36865281 Phaseolus vulgaris
Phvul.009G248100 5.0kb upstream 5.0kb upstream 6359 true Chr09: 36865282-36871640 Phaseolus vulgaris
Phvul.009G248100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 36866641-36871640 Phaseolus vulgaris
Phvul.009G248100 5.0kb downstream 5.0kb downstream 6359 true Chr09: 36860282-36866640 Phaseolus vulgaris
Phvul.009G248100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 36860282-36865281 Phaseolus vulgaris
Phvul.009G248100 10.0kb upstream 10.0kb upstream 11359 true Chr09: 36865282-36876640 Phaseolus vulgaris
Phvul.009G248100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 36866641-36876640 Phaseolus vulgaris
Phvul.009G248100 10.0kb downstream 10.0kb downstream 11359 true Chr09: 36855282-36866640 Phaseolus vulgaris
Phvul.009G248100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 36855282-36865281 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311816 5265 Fabidae View MSA
124064369 5270 Rosid View MSA
123736946 5271 Pentapetalae View MSA
122789380 5272 Eudicot View MSA
122042255 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.0785 0.0 49.5552   Low
cufflinks 45.0283 0.0 117.729 High  
cufflinks 28.807 0.0 74.4617   Low
cufflinks 95.2765 0.0 264.803 High High
cufflinks 59.7998 0.0 159.582 High  
cufflinks 45.8449 0.0 119.94 High  
cufflinks 42.7464 0.0 111.767 High  
cufflinks 35.2486 0.0 91.3589 High  
cufflinks 59.7842 0.0 159.517 High  
cufflinks 64.885 0.0 173.99 High  
cufflinks 66.3855 0.0 178.733 High  

0 Strain