Gene : Phvul.009G252300 P. vulgaris v2.1
Defline:  (1 of 46) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  2581
Name:  ? Phvul.009G252300 Secondary Identifier:  ? PAC:37151100
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G252300 0.5kb upstream 0.5kb upstream 1537 true Chr09: 37295048-37296584 Phaseolus vulgaris
Phvul.009G252300 0.5kb upstream 0.5kb upstream 500 false Chr09: 37296085-37296584 Phaseolus vulgaris
Phvul.009G252300 0.5kb downstream 0.5kb downstream 1537 true Chr09: 37294548-37296084 Phaseolus vulgaris
Phvul.009G252300 0.5kb downstream 0.5kb downstream 500 false Chr09: 37294548-37295047 Phaseolus vulgaris
Phvul.009G252300 1.0kb upstream 1.0kb upstream 2037 true Chr09: 37295048-37297084 Phaseolus vulgaris
Phvul.009G252300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37296085-37297084 Phaseolus vulgaris
Phvul.009G252300 1.0kb downstream 1.0kb downstream 2037 true Chr09: 37294048-37296084 Phaseolus vulgaris
Phvul.009G252300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37294048-37295047 Phaseolus vulgaris
Phvul.009G252300 2.0kb upstream 2.0kb upstream 3037 true Chr09: 37295048-37298084 Phaseolus vulgaris
Phvul.009G252300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37296085-37298084 Phaseolus vulgaris
Phvul.009G252300 2.0kb downstream 2.0kb downstream 3037 true Chr09: 37293048-37296084 Phaseolus vulgaris
Phvul.009G252300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37293048-37295047 Phaseolus vulgaris
Phvul.009G252300 5.0kb upstream 5.0kb upstream 6037 true Chr09: 37295048-37301084 Phaseolus vulgaris
Phvul.009G252300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37296085-37301084 Phaseolus vulgaris
Phvul.009G252300 5.0kb downstream 5.0kb downstream 6037 true Chr09: 37290048-37296084 Phaseolus vulgaris
Phvul.009G252300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37290048-37295047 Phaseolus vulgaris
Phvul.009G252300 10.0kb upstream 10.0kb upstream 11037 true Chr09: 37295048-37306084 Phaseolus vulgaris
Phvul.009G252300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37296085-37306084 Phaseolus vulgaris
Phvul.009G252300 10.0kb downstream 10.0kb downstream 11037 true Chr09: 37285048-37296084 Phaseolus vulgaris
Phvul.009G252300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37285048-37295047 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312646 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.83646 0.0 28.5372    
cufflinks 1.36725 0.0 4.95499   Low
cufflinks 0.991479 0.0 3.67823   Low
cufflinks 8.06324 0.0 24.2401    
cufflinks 17.8568 0.0 49.4049   High
cufflinks 1.14717 0.0 4.21751   Low
cufflinks 9.38611 0.0 27.4921    
cufflinks 7.70123 0.0 23.0054    
cufflinks 12.0392 0.0 34.4628    
cufflinks 4.09109 0.0 13.2105    
cufflinks 7.40601 0.0 22.4239    

0 Strain