Gene : Phvul.009G252400 P. vulgaris v2.1
Defline:  (1 of 46) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  2582
Name:  ? Phvul.009G252400 Secondary Identifier:  ? PAC:37150527
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G252400 0.5kb upstream 0.5kb upstream 2410 true Chr09: 37300236-37302645 Phaseolus vulgaris
Phvul.009G252400 0.5kb upstream 0.5kb upstream 500 false Chr09: 37302146-37302645 Phaseolus vulgaris
Phvul.009G252400 0.5kb downstream 0.5kb downstream 2410 true Chr09: 37299736-37302145 Phaseolus vulgaris
Phvul.009G252400 0.5kb downstream 0.5kb downstream 500 false Chr09: 37299736-37300235 Phaseolus vulgaris
Phvul.009G252400 1.0kb upstream 1.0kb upstream 2910 true Chr09: 37300236-37303145 Phaseolus vulgaris
Phvul.009G252400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37302146-37303145 Phaseolus vulgaris
Phvul.009G252400 1.0kb downstream 1.0kb downstream 2910 true Chr09: 37299236-37302145 Phaseolus vulgaris
Phvul.009G252400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37299236-37300235 Phaseolus vulgaris
Phvul.009G252400 2.0kb upstream 2.0kb upstream 3910 true Chr09: 37300236-37304145 Phaseolus vulgaris
Phvul.009G252400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37302146-37304145 Phaseolus vulgaris
Phvul.009G252400 2.0kb downstream 2.0kb downstream 3910 true Chr09: 37298236-37302145 Phaseolus vulgaris
Phvul.009G252400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37298236-37300235 Phaseolus vulgaris
Phvul.009G252400 5.0kb upstream 5.0kb upstream 6910 true Chr09: 37300236-37307145 Phaseolus vulgaris
Phvul.009G252400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37302146-37307145 Phaseolus vulgaris
Phvul.009G252400 5.0kb downstream 5.0kb downstream 6910 true Chr09: 37295236-37302145 Phaseolus vulgaris
Phvul.009G252400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37295236-37300235 Phaseolus vulgaris
Phvul.009G252400 10.0kb upstream 10.0kb upstream 11910 true Chr09: 37300236-37312145 Phaseolus vulgaris
Phvul.009G252400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37302146-37312145 Phaseolus vulgaris
Phvul.009G252400 10.0kb downstream 10.0kb downstream 11910 true Chr09: 37290236-37302145 Phaseolus vulgaris
Phvul.009G252400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37290236-37300235 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312983 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 123.417 0.0 344.373 High  
cufflinks 137.463 0.0 388.703 High  
cufflinks 96.6606 0.0 264.086 High  
cufflinks 1362.72 0.0 6111.75 High High
cufflinks 113.269 0.0 310.673 High  
cufflinks 206.288 0.0 616.55 High  
cufflinks 1.80786 0.0 5.97533   Low
cufflinks 1.44172 0.0 4.85343   Low
cufflinks 0.646405 0.0 2.3809   Low
cufflinks 0.848409 0.0 3.05329   Low
cufflinks 163.793 0.0 469.199 High  

0 Strain