Gene : Phvul.009G254900 P. vulgaris v2.1
Defline:  (1 of 3) 1.8.1.4 - Dihydrolipoyl dehydrogenase / Lipoyl dehydrogenase Genomic Order:  2607
Name:  ? Phvul.009G254900 Secondary Identifier:  ? PAC:37149901
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris GLYCLEAV-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-5046 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5084 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5173 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5464 Phaseolus vulgaris pathologic  
Pvulgaris PYRUVDEHYD-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G254900 0.5kb upstream 0.5kb upstream 8963 true Chr09: 37526400-37535362 Phaseolus vulgaris
Phvul.009G254900 0.5kb upstream 0.5kb upstream 500 false Chr09: 37534863-37535362 Phaseolus vulgaris
Phvul.009G254900 0.5kb downstream 0.5kb downstream 8963 true Chr09: 37525900-37534862 Phaseolus vulgaris
Phvul.009G254900 0.5kb downstream 0.5kb downstream 500 false Chr09: 37525900-37526399 Phaseolus vulgaris
Phvul.009G254900 1.0kb upstream 1.0kb upstream 9463 true Chr09: 37526400-37535862 Phaseolus vulgaris
Phvul.009G254900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37534863-37535862 Phaseolus vulgaris
Phvul.009G254900 1.0kb downstream 1.0kb downstream 9463 true Chr09: 37525400-37534862 Phaseolus vulgaris
Phvul.009G254900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37525400-37526399 Phaseolus vulgaris
Phvul.009G254900 2.0kb upstream 2.0kb upstream 10463 true Chr09: 37526400-37536862 Phaseolus vulgaris
Phvul.009G254900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37534863-37536862 Phaseolus vulgaris
Phvul.009G254900 2.0kb downstream 2.0kb downstream 10463 true Chr09: 37524400-37534862 Phaseolus vulgaris
Phvul.009G254900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37524400-37526399 Phaseolus vulgaris
Phvul.009G254900 5.0kb upstream 5.0kb upstream 13463 true Chr09: 37526400-37539862 Phaseolus vulgaris
Phvul.009G254900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37534863-37539862 Phaseolus vulgaris
Phvul.009G254900 5.0kb downstream 5.0kb downstream 13463 true Chr09: 37521400-37534862 Phaseolus vulgaris
Phvul.009G254900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37521400-37526399 Phaseolus vulgaris
Phvul.009G254900 10.0kb upstream 10.0kb upstream 18463 true Chr09: 37526400-37544862 Phaseolus vulgaris
Phvul.009G254900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37534863-37544862 Phaseolus vulgaris
Phvul.009G254900 10.0kb downstream 10.0kb downstream 18463 true Chr09: 37516400-37534862 Phaseolus vulgaris
Phvul.009G254900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37516400-37526399 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041061 5273 Angiosperm View MSA
122298154 5265 Fabidae View MSA
124065612 5270 Rosid View MSA
123745310 5271 Pentapetalae View MSA
122789628 5272 Eudicot View MSA
121346469 5274 Embryophyte View MSA
123424550 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.12587 0.0 14.2394    
cufflinks 20.8825 0.0 53.9947   High
cufflinks 31.1985 0.0 81.5968   High
cufflinks 8.9045 0.0 23.7108    
cufflinks 9.18145 0.0 24.3719    
cufflinks 28.6661 0.0 74.6433   High
cufflinks 3.1969 0.0 9.30736   Low
cufflinks 4.21822 0.0 11.9273    
cufflinks 2.43464 0.0 7.32947   Low
cufflinks 9.78333 0.0 25.8105    
cufflinks 8.19435 0.0 21.9134    

0 Strain