Gene : Phvul.009G253500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR23316:SF22 - ARMADILLO/BETA-CATENIN-LIKE REPEATS-CONTAINING PROTEIN-RELATED Genomic Order:  2593
Name:  ? Phvul.009G253500 Secondary Identifier:  ? PAC:37149651
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G253500 0.5kb upstream 0.5kb upstream 5692 true Chr09: 37365991-37371682 Phaseolus vulgaris
Phvul.009G253500 0.5kb upstream 0.5kb upstream 500 false Chr09: 37371183-37371682 Phaseolus vulgaris
Phvul.009G253500 0.5kb downstream 0.5kb downstream 5692 true Chr09: 37365491-37371182 Phaseolus vulgaris
Phvul.009G253500 0.5kb downstream 0.5kb downstream 500 false Chr09: 37365491-37365990 Phaseolus vulgaris
Phvul.009G253500 1.0kb upstream 1.0kb upstream 6192 true Chr09: 37365991-37372182 Phaseolus vulgaris
Phvul.009G253500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37371183-37372182 Phaseolus vulgaris
Phvul.009G253500 1.0kb downstream 1.0kb downstream 6192 true Chr09: 37364991-37371182 Phaseolus vulgaris
Phvul.009G253500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37364991-37365990 Phaseolus vulgaris
Phvul.009G253500 2.0kb upstream 2.0kb upstream 7192 true Chr09: 37365991-37373182 Phaseolus vulgaris
Phvul.009G253500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37371183-37373182 Phaseolus vulgaris
Phvul.009G253500 2.0kb downstream 2.0kb downstream 7192 true Chr09: 37363991-37371182 Phaseolus vulgaris
Phvul.009G253500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37363991-37365990 Phaseolus vulgaris
Phvul.009G253500 5.0kb upstream 5.0kb upstream 10192 true Chr09: 37365991-37376182 Phaseolus vulgaris
Phvul.009G253500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37371183-37376182 Phaseolus vulgaris
Phvul.009G253500 5.0kb downstream 5.0kb downstream 10192 true Chr09: 37360991-37371182 Phaseolus vulgaris
Phvul.009G253500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37360991-37365990 Phaseolus vulgaris
Phvul.009G253500 10.0kb upstream 10.0kb upstream 15192 true Chr09: 37365991-37381182 Phaseolus vulgaris
Phvul.009G253500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37371183-37381182 Phaseolus vulgaris
Phvul.009G253500 10.0kb downstream 10.0kb downstream 15192 true Chr09: 37355991-37371182 Phaseolus vulgaris
Phvul.009G253500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37355991-37365990 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041121 5273 Angiosperm View MSA
122309927 5265 Fabidae View MSA
124069677 5270 Rosid View MSA
123750756 5271 Pentapetalae View MSA
122792283 5272 Eudicot View MSA
121348544 5274 Embryophyte View MSA
123424377 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 44.4772 0.0 121.736 High Low
cufflinks 53.0595 0.0 147.785 High  
cufflinks 54.4307 0.0 151.761 High  
cufflinks 54.4659 0.0 150.898 High  
cufflinks 75.3556 0.0 218.435 High High
cufflinks 48.5238 0.0 133.765 High  
cufflinks 57.5953 0.0 162.12 High  
cufflinks 43.3186 0.0 118.469 High Low
cufflinks 82.7127 0.0 242.793 High High
cufflinks 62.5675 0.0 177.458 High  
cufflinks 85.8613 0.0 253.411 High High

0 Strain