Gene : Phvul.009G252700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31875:SF6 - PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4-RELATED Genomic Order:  2585
Name:  ? Phvul.009G252700 Secondary Identifier:  ? PAC:37151539
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G252700 0.5kb upstream 0.5kb upstream 4206 true Chr09: 37313951-37318156 Phaseolus vulgaris
Phvul.009G252700 0.5kb upstream 0.5kb upstream 500 false Chr09: 37313951-37314450 Phaseolus vulgaris
Phvul.009G252700 0.5kb downstream 0.5kb downstream 4206 true Chr09: 37314451-37318656 Phaseolus vulgaris
Phvul.009G252700 0.5kb downstream 0.5kb downstream 500 false Chr09: 37318157-37318656 Phaseolus vulgaris
Phvul.009G252700 1.0kb upstream 1.0kb upstream 4706 true Chr09: 37313451-37318156 Phaseolus vulgaris
Phvul.009G252700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37313451-37314450 Phaseolus vulgaris
Phvul.009G252700 1.0kb downstream 1.0kb downstream 4706 true Chr09: 37314451-37319156 Phaseolus vulgaris
Phvul.009G252700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37318157-37319156 Phaseolus vulgaris
Phvul.009G252700 2.0kb upstream 2.0kb upstream 5706 true Chr09: 37312451-37318156 Phaseolus vulgaris
Phvul.009G252700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37312451-37314450 Phaseolus vulgaris
Phvul.009G252700 2.0kb downstream 2.0kb downstream 5706 true Chr09: 37314451-37320156 Phaseolus vulgaris
Phvul.009G252700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37318157-37320156 Phaseolus vulgaris
Phvul.009G252700 5.0kb upstream 5.0kb upstream 8706 true Chr09: 37309451-37318156 Phaseolus vulgaris
Phvul.009G252700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37309451-37314450 Phaseolus vulgaris
Phvul.009G252700 5.0kb downstream 5.0kb downstream 8706 true Chr09: 37314451-37323156 Phaseolus vulgaris
Phvul.009G252700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37318157-37323156 Phaseolus vulgaris
Phvul.009G252700 10.0kb upstream 10.0kb upstream 13706 true Chr09: 37304451-37318156 Phaseolus vulgaris
Phvul.009G252700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37304451-37314450 Phaseolus vulgaris
Phvul.009G252700 10.0kb downstream 10.0kb downstream 13706 true Chr09: 37314451-37328156 Phaseolus vulgaris
Phvul.009G252700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37318157-37328156 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308140 5265 Fabidae View MSA
124071029 5270 Rosid View MSA
123742538 5271 Pentapetalae View MSA
122794267 5272 Eudicot View MSA
122043196 5273 Angiosperm View MSA
121347850 5274 Embryophyte View MSA
123380651 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.4166 0.0 135.755 High  
cufflinks 112.447 0.0 303.496 High  
cufflinks 23.3221 0.0 61.2794   Low
cufflinks 87.5804 0.0 231.506 High  
cufflinks 119.15 0.0 321.57 High  
cufflinks 28.1998 0.0 73.4373    
cufflinks 35.9505 0.0 93.02 High  
cufflinks 26.0748 0.0 68.11   Low
cufflinks 46.5188 0.0 120.269 High  
cufflinks 345.294 0.0 1066.21 High High
cufflinks 68.4332 0.0 178.532 High  

0 Strain