Gene : Phvul.009G252900 P. vulgaris v2.1
Defline:  (1 of 46) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  2587
Name:  ? Phvul.009G252900 Secondary Identifier:  ? PAC:37151957
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G252900 0.5kb upstream 0.5kb upstream 2301 true Chr09: 37324430-37326730 Phaseolus vulgaris
Phvul.009G252900 0.5kb upstream 0.5kb upstream 500 false Chr09: 37324430-37324929 Phaseolus vulgaris
Phvul.009G252900 0.5kb downstream 0.5kb downstream 2301 true Chr09: 37324930-37327230 Phaseolus vulgaris
Phvul.009G252900 0.5kb downstream 0.5kb downstream 500 false Chr09: 37326731-37327230 Phaseolus vulgaris
Phvul.009G252900 1.0kb upstream 1.0kb upstream 2801 true Chr09: 37323930-37326730 Phaseolus vulgaris
Phvul.009G252900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37323930-37324929 Phaseolus vulgaris
Phvul.009G252900 1.0kb downstream 1.0kb downstream 2801 true Chr09: 37324930-37327730 Phaseolus vulgaris
Phvul.009G252900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37326731-37327730 Phaseolus vulgaris
Phvul.009G252900 2.0kb upstream 2.0kb upstream 3801 true Chr09: 37322930-37326730 Phaseolus vulgaris
Phvul.009G252900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37322930-37324929 Phaseolus vulgaris
Phvul.009G252900 2.0kb downstream 2.0kb downstream 3801 true Chr09: 37324930-37328730 Phaseolus vulgaris
Phvul.009G252900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37326731-37328730 Phaseolus vulgaris
Phvul.009G252900 5.0kb upstream 5.0kb upstream 6801 true Chr09: 37319930-37326730 Phaseolus vulgaris
Phvul.009G252900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37319930-37324929 Phaseolus vulgaris
Phvul.009G252900 5.0kb downstream 5.0kb downstream 6801 true Chr09: 37324930-37331730 Phaseolus vulgaris
Phvul.009G252900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37326731-37331730 Phaseolus vulgaris
Phvul.009G252900 10.0kb upstream 10.0kb upstream 11801 true Chr09: 37314930-37326730 Phaseolus vulgaris
Phvul.009G252900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37314930-37324929 Phaseolus vulgaris
Phvul.009G252900 10.0kb downstream 10.0kb downstream 11801 true Chr09: 37324930-37336730 Phaseolus vulgaris
Phvul.009G252900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37326731-37336730 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315508 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.154908 0.0 0.671752 Low  
cufflinks 0.953218 0.0 3.57347    
cufflinks 0.105867 0.0 0.475131 Low Low
cufflinks 35.506 0.0 92.608 High  
cufflinks 13.5173 0.0 37.921    
cufflinks 243.543 0.0 693.096 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.256706 0.0 1.06566 Low  

0 Strain