Gene : Phvul.009G255100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15371:SF1 - OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC Genomic Order:  2609
Name:  ? Phvul.009G255100 Secondary Identifier:  ? PAC:37151366
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G255100 0.5kb upstream 0.5kb upstream 2603 true Chr09: 37561523-37564125 Phaseolus vulgaris
Phvul.009G255100 0.5kb upstream 0.5kb upstream 500 false Chr09: 37561523-37562022 Phaseolus vulgaris
Phvul.009G255100 0.5kb downstream 0.5kb downstream 2603 true Chr09: 37562023-37564625 Phaseolus vulgaris
Phvul.009G255100 0.5kb downstream 0.5kb downstream 500 false Chr09: 37564126-37564625 Phaseolus vulgaris
Phvul.009G255100 1.0kb upstream 1.0kb upstream 3103 true Chr09: 37561023-37564125 Phaseolus vulgaris
Phvul.009G255100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 37561023-37562022 Phaseolus vulgaris
Phvul.009G255100 1.0kb downstream 1.0kb downstream 3103 true Chr09: 37562023-37565125 Phaseolus vulgaris
Phvul.009G255100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 37564126-37565125 Phaseolus vulgaris
Phvul.009G255100 2.0kb upstream 2.0kb upstream 4103 true Chr09: 37560023-37564125 Phaseolus vulgaris
Phvul.009G255100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 37560023-37562022 Phaseolus vulgaris
Phvul.009G255100 2.0kb downstream 2.0kb downstream 4103 true Chr09: 37562023-37566125 Phaseolus vulgaris
Phvul.009G255100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 37564126-37566125 Phaseolus vulgaris
Phvul.009G255100 5.0kb upstream 5.0kb upstream 7103 true Chr09: 37557023-37564125 Phaseolus vulgaris
Phvul.009G255100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 37557023-37562022 Phaseolus vulgaris
Phvul.009G255100 5.0kb downstream 5.0kb downstream 7103 true Chr09: 37562023-37569125 Phaseolus vulgaris
Phvul.009G255100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 37564126-37569125 Phaseolus vulgaris
Phvul.009G255100 10.0kb upstream 10.0kb upstream 12103 true Chr09: 37552023-37564125 Phaseolus vulgaris
Phvul.009G255100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 37552023-37562022 Phaseolus vulgaris
Phvul.009G255100 10.0kb downstream 10.0kb downstream 12103 true Chr09: 37562023-37574125 Phaseolus vulgaris
Phvul.009G255100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 37564126-37574125 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311565 5265 Fabidae View MSA
124062569 5270 Rosid View MSA
123744668 5271 Pentapetalae View MSA
122786883 5272 Eudicot View MSA
122042024 5273 Angiosperm View MSA
121351081 5274 Embryophyte View MSA
123382000 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.23515 0.0 0.985759 Low  
cufflinks 0.255531 0.0 1.06309 Low  
cufflinks 0.145836 0.0 0.65142 Low  
cufflinks 1.35166 0.0 6.03085   High
cufflinks 1.0083 0.0 6.7007   High
cufflinks 0.476389 0.0 1.88033 Low  
cufflinks 0.0433876 0.0 0.243736 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0948446 0.0 0.448568 Low  
cufflinks 0.0227221 0.0 0.162322 Low Low
cufflinks 0.884037 0.0 4.14809    

0 Strain