Gene : Phvul.009G240400 P. vulgaris v2.1

Defline:  (1 of 4) PTHR24177:SF42 - ANKYRIN REPEAT FAMILY PROTEIN Genomic Order:  2452
Name:  ? Phvul.009G240400 Secondary Identifier:  ? PAC:37150042

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G240400 0.5kb upstream 0.5kb upstream 5778 true Chr09: 35930819-35936596 Phaseolus vulgaris
Phvul.009G240400 0.5kb upstream 0.5kb upstream 500 false Chr09: 35930819-35931318 Phaseolus vulgaris
Phvul.009G240400 0.5kb downstream 0.5kb downstream 5778 true Chr09: 35931319-35937096 Phaseolus vulgaris
Phvul.009G240400 0.5kb downstream 0.5kb downstream 500 false Chr09: 35936597-35937096 Phaseolus vulgaris
Phvul.009G240400 1.0kb upstream 1.0kb upstream 6278 true Chr09: 35930319-35936596 Phaseolus vulgaris
Phvul.009G240400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 35930319-35931318 Phaseolus vulgaris
Phvul.009G240400 1.0kb downstream 1.0kb downstream 6278 true Chr09: 35931319-35937596 Phaseolus vulgaris
Phvul.009G240400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 35936597-35937596 Phaseolus vulgaris
Phvul.009G240400 2.0kb upstream 2.0kb upstream 7278 true Chr09: 35929319-35936596 Phaseolus vulgaris
Phvul.009G240400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 35929319-35931318 Phaseolus vulgaris
Phvul.009G240400 2.0kb downstream 2.0kb downstream 7278 true Chr09: 35931319-35938596 Phaseolus vulgaris
Phvul.009G240400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 35936597-35938596 Phaseolus vulgaris
Phvul.009G240400 5.0kb upstream 5.0kb upstream 10278 true Chr09: 35926319-35936596 Phaseolus vulgaris
Phvul.009G240400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 35926319-35931318 Phaseolus vulgaris
Phvul.009G240400 5.0kb downstream 5.0kb downstream 10278 true Chr09: 35931319-35941596 Phaseolus vulgaris
Phvul.009G240400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 35936597-35941596 Phaseolus vulgaris
Phvul.009G240400 10.0kb upstream 10.0kb upstream 15278 true Chr09: 35921319-35936596 Phaseolus vulgaris
Phvul.009G240400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 35921319-35931318 Phaseolus vulgaris
Phvul.009G240400 10.0kb downstream 10.0kb downstream 15278 true Chr09: 35931319-35946596 Phaseolus vulgaris
Phvul.009G240400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 35936597-35946596 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310241 5265 Fabidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.13315 0.0 10.9803    
cufflinks 1.91584 0.0 9.0435    
cufflinks 0.94172 0.0 4.50005   Low
cufflinks 2.32221 0.0 10.6074    
cufflinks 1.94521 0.0 7.95993    
cufflinks 1.72886 0.0 8.41143    
cufflinks 1.4351 0.0 7.39899    
cufflinks 1.35404 0.0 6.02618    
cufflinks 0.544771 0.0 3.08036   Low
cufflinks 2.38467 0.0 11.9295    
cufflinks 2.78345 0.0 12.1134   High

0 Strain