Gene : Phvul.009G240300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23089:SF3 - HISTIDINE TRIAD NUCLEOTIDE-BINDING PROTEIN 1 Genomic Order:  2451
Name:  ? Phvul.009G240300 Secondary Identifier:  ? PAC:37150804
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G240300 0.5kb upstream 0.5kb upstream 3623 true Chr09: 35926465-35930087 Phaseolus vulgaris
Phvul.009G240300 0.5kb upstream 0.5kb upstream 500 false Chr09: 35926465-35926964 Phaseolus vulgaris
Phvul.009G240300 0.5kb downstream 0.5kb downstream 3623 true Chr09: 35926965-35930587 Phaseolus vulgaris
Phvul.009G240300 0.5kb downstream 0.5kb downstream 500 false Chr09: 35930088-35930587 Phaseolus vulgaris
Phvul.009G240300 1.0kb upstream 1.0kb upstream 4123 true Chr09: 35925965-35930087 Phaseolus vulgaris
Phvul.009G240300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 35925965-35926964 Phaseolus vulgaris
Phvul.009G240300 1.0kb downstream 1.0kb downstream 4123 true Chr09: 35926965-35931087 Phaseolus vulgaris
Phvul.009G240300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 35930088-35931087 Phaseolus vulgaris
Phvul.009G240300 2.0kb upstream 2.0kb upstream 5123 true Chr09: 35924965-35930087 Phaseolus vulgaris
Phvul.009G240300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 35924965-35926964 Phaseolus vulgaris
Phvul.009G240300 2.0kb downstream 2.0kb downstream 5123 true Chr09: 35926965-35932087 Phaseolus vulgaris
Phvul.009G240300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 35930088-35932087 Phaseolus vulgaris
Phvul.009G240300 5.0kb upstream 5.0kb upstream 8123 true Chr09: 35921965-35930087 Phaseolus vulgaris
Phvul.009G240300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 35921965-35926964 Phaseolus vulgaris
Phvul.009G240300 5.0kb downstream 5.0kb downstream 8123 true Chr09: 35926965-35935087 Phaseolus vulgaris
Phvul.009G240300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 35930088-35935087 Phaseolus vulgaris
Phvul.009G240300 10.0kb upstream 10.0kb upstream 13123 true Chr09: 35916965-35930087 Phaseolus vulgaris
Phvul.009G240300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 35916965-35926964 Phaseolus vulgaris
Phvul.009G240300 10.0kb downstream 10.0kb downstream 13123 true Chr09: 35926965-35940087 Phaseolus vulgaris
Phvul.009G240300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 35930088-35940087 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303854 5265 Fabidae View MSA
124063268 5270 Rosid View MSA
123738121 5271 Pentapetalae View MSA
122789246 5272 Eudicot View MSA
122042822 5273 Angiosperm View MSA
121347396 5274 Embryophyte View MSA
123425482 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2778 0.0 38.351    
cufflinks 14.0791 0.0 40.614    
cufflinks 28.0506 0.0 76.0327   High
cufflinks 10.3175 0.0 30.7972    
cufflinks 8.39644 0.0 26.1024    
cufflinks 17.0864 0.0 48.2945    
cufflinks 2.76777 0.0 9.58443   Low
cufflinks 6.0999 0.0 19.2801    
cufflinks 3.34016 0.0 11.3362   Low
cufflinks 9.53214 0.0 28.8542    
cufflinks 7.36776 0.0 23.0792    

0 Strain