Gene : Phvul.009G243200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR14237:SF30 - MITOCHONDRIAL AMIDOXIME-REDUCING COMPONENT 1 Genomic Order:  2490
Name:  ? Phvul.009G243200 Secondary Identifier:  ? PAC:37150840
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5963 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G243200 0.5kb upstream 0.5kb upstream 3616 true Chr09: 36420275-36423890 Phaseolus vulgaris
Phvul.009G243200 0.5kb upstream 0.5kb upstream 500 false Chr09: 36423391-36423890 Phaseolus vulgaris
Phvul.009G243200 0.5kb downstream 0.5kb downstream 3616 true Chr09: 36419775-36423390 Phaseolus vulgaris
Phvul.009G243200 0.5kb downstream 0.5kb downstream 500 false Chr09: 36419775-36420274 Phaseolus vulgaris
Phvul.009G243200 1.0kb upstream 1.0kb upstream 4116 true Chr09: 36420275-36424390 Phaseolus vulgaris
Phvul.009G243200 1.0kb upstream 1.0kb upstream 1000 false Chr09: 36423391-36424390 Phaseolus vulgaris
Phvul.009G243200 1.0kb downstream 1.0kb downstream 4116 true Chr09: 36419275-36423390 Phaseolus vulgaris
Phvul.009G243200 1.0kb downstream 1.0kb downstream 1000 false Chr09: 36419275-36420274 Phaseolus vulgaris
Phvul.009G243200 2.0kb upstream 2.0kb upstream 5116 true Chr09: 36420275-36425390 Phaseolus vulgaris
Phvul.009G243200 2.0kb upstream 2.0kb upstream 2000 false Chr09: 36423391-36425390 Phaseolus vulgaris
Phvul.009G243200 2.0kb downstream 2.0kb downstream 5116 true Chr09: 36418275-36423390 Phaseolus vulgaris
Phvul.009G243200 2.0kb downstream 2.0kb downstream 2000 false Chr09: 36418275-36420274 Phaseolus vulgaris
Phvul.009G243200 5.0kb upstream 5.0kb upstream 8116 true Chr09: 36420275-36428390 Phaseolus vulgaris
Phvul.009G243200 5.0kb upstream 5.0kb upstream 5000 false Chr09: 36423391-36428390 Phaseolus vulgaris
Phvul.009G243200 5.0kb downstream 5.0kb downstream 8116 true Chr09: 36415275-36423390 Phaseolus vulgaris
Phvul.009G243200 5.0kb downstream 5.0kb downstream 5000 false Chr09: 36415275-36420274 Phaseolus vulgaris
Phvul.009G243200 10.0kb upstream 10.0kb upstream 13116 true Chr09: 36420275-36433390 Phaseolus vulgaris
Phvul.009G243200 10.0kb upstream 10.0kb upstream 10000 false Chr09: 36423391-36433390 Phaseolus vulgaris
Phvul.009G243200 10.0kb downstream 10.0kb downstream 13116 true Chr09: 36410275-36423390 Phaseolus vulgaris
Phvul.009G243200 10.0kb downstream 10.0kb downstream 10000 false Chr09: 36410275-36420274 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311659 5265 Fabidae View MSA
124065334 5270 Rosid View MSA
123736927 5271 Pentapetalae View MSA
122792643 5272 Eudicot View MSA
122043484 5273 Angiosperm View MSA
123428941 5275 Viridiplantae View MSA
121347613 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.8468 0.0 24.7873    
cufflinks 23.2296 0.0 60.5728    
cufflinks 37.6089 0.0 97.2427    
cufflinks 7.75465 0.0 22.193    
cufflinks 12.2492 0.0 33.6125    
cufflinks 17.6806 0.0 46.7446    
cufflinks 0.142905 0.0 0.59656 Low Low
cufflinks 0.182092 0.0 0.742093 Low Low
cufflinks 0.316827 0.0 1.24361 Low Low
cufflinks 26.6654 0.0 69.2338    
cufflinks 11.0462 0.0 30.5193    

0 Strain