Gene : Phvul.009G241300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31065:SF14 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  2471
Name:  ? Phvul.009G241300 Secondary Identifier:  ? PAC:37149062
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G241300 0.5kb upstream 0.5kb upstream 5719 true Chr09: 36234436-36240154 Phaseolus vulgaris
Phvul.009G241300 0.5kb upstream 0.5kb upstream 500 false Chr09: 36239655-36240154 Phaseolus vulgaris
Phvul.009G241300 0.5kb downstream 0.5kb downstream 5719 true Chr09: 36233936-36239654 Phaseolus vulgaris
Phvul.009G241300 0.5kb downstream 0.5kb downstream 500 false Chr09: 36233936-36234435 Phaseolus vulgaris
Phvul.009G241300 1.0kb upstream 1.0kb upstream 6219 true Chr09: 36234436-36240654 Phaseolus vulgaris
Phvul.009G241300 1.0kb upstream 1.0kb upstream 1000 false Chr09: 36239655-36240654 Phaseolus vulgaris
Phvul.009G241300 1.0kb downstream 1.0kb downstream 6219 true Chr09: 36233436-36239654 Phaseolus vulgaris
Phvul.009G241300 1.0kb downstream 1.0kb downstream 1000 false Chr09: 36233436-36234435 Phaseolus vulgaris
Phvul.009G241300 2.0kb upstream 2.0kb upstream 7219 true Chr09: 36234436-36241654 Phaseolus vulgaris
Phvul.009G241300 2.0kb upstream 2.0kb upstream 2000 false Chr09: 36239655-36241654 Phaseolus vulgaris
Phvul.009G241300 2.0kb downstream 2.0kb downstream 7219 true Chr09: 36232436-36239654 Phaseolus vulgaris
Phvul.009G241300 2.0kb downstream 2.0kb downstream 2000 false Chr09: 36232436-36234435 Phaseolus vulgaris
Phvul.009G241300 5.0kb upstream 5.0kb upstream 10219 true Chr09: 36234436-36244654 Phaseolus vulgaris
Phvul.009G241300 5.0kb upstream 5.0kb upstream 5000 false Chr09: 36239655-36244654 Phaseolus vulgaris
Phvul.009G241300 5.0kb downstream 5.0kb downstream 10219 true Chr09: 36229436-36239654 Phaseolus vulgaris
Phvul.009G241300 5.0kb downstream 5.0kb downstream 5000 false Chr09: 36229436-36234435 Phaseolus vulgaris
Phvul.009G241300 10.0kb upstream 10.0kb upstream 15219 true Chr09: 36234436-36249654 Phaseolus vulgaris
Phvul.009G241300 10.0kb upstream 10.0kb upstream 10000 false Chr09: 36239655-36249654 Phaseolus vulgaris
Phvul.009G241300 10.0kb downstream 10.0kb downstream 15219 true Chr09: 36224436-36239654 Phaseolus vulgaris
Phvul.009G241300 10.0kb downstream 10.0kb downstream 10000 false Chr09: 36224436-36234435 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306364 5265 Fabidae View MSA
124068522 5270 Rosid View MSA
123747069 5271 Pentapetalae View MSA
122791391 5272 Eudicot View MSA
122044768 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.216599 0.0 0.878482 Low  
cufflinks 0.396124 0.0 1.93681 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.176994 0.0 0.741832 Low  
cufflinks 0.759518 0.0 3.42314    
cufflinks 0.0683197 0.0 0.307138 Low  
cufflinks 0.601505 0.0 2.72232    
cufflinks 1.86604 0.0 7.02892   High
cufflinks 0.179664 0.0 0.747952 Low  
cufflinks 0.0142732 0.0 0.111729 Low Low
cufflinks 1.06374 0.0 6.29703    

0 Strain