Gene : Phvul.009G242400 P. vulgaris v2.1
Defline:  (1 of 3) 2.7.7.15 - Choline-phosphate cytidylyltransferase / Phosphorylcholine transferase Genomic Order:  2482
Name:  ? Phvul.009G242400 Secondary Identifier:  ? PAC:37151435
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3561 Phaseolus vulgaris pathologic  
Pvulgaris PWY3O-450 Phaseolus vulgaris pathologic  
Pvulgaris PWY4FS-2 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G242400 0.5kb upstream 0.5kb upstream 5748 true Chr09: 36345359-36351106 Phaseolus vulgaris
Phvul.009G242400 0.5kb upstream 0.5kb upstream 500 false Chr09: 36345359-36345858 Phaseolus vulgaris
Phvul.009G242400 0.5kb downstream 0.5kb downstream 5748 true Chr09: 36345859-36351606 Phaseolus vulgaris
Phvul.009G242400 0.5kb downstream 0.5kb downstream 500 false Chr09: 36351107-36351606 Phaseolus vulgaris
Phvul.009G242400 1.0kb upstream 1.0kb upstream 6248 true Chr09: 36344859-36351106 Phaseolus vulgaris
Phvul.009G242400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 36344859-36345858 Phaseolus vulgaris
Phvul.009G242400 1.0kb downstream 1.0kb downstream 6248 true Chr09: 36345859-36352106 Phaseolus vulgaris
Phvul.009G242400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 36351107-36352106 Phaseolus vulgaris
Phvul.009G242400 2.0kb upstream 2.0kb upstream 7248 true Chr09: 36343859-36351106 Phaseolus vulgaris
Phvul.009G242400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 36343859-36345858 Phaseolus vulgaris
Phvul.009G242400 2.0kb downstream 2.0kb downstream 7248 true Chr09: 36345859-36353106 Phaseolus vulgaris
Phvul.009G242400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 36351107-36353106 Phaseolus vulgaris
Phvul.009G242400 5.0kb upstream 5.0kb upstream 10248 true Chr09: 36340859-36351106 Phaseolus vulgaris
Phvul.009G242400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 36340859-36345858 Phaseolus vulgaris
Phvul.009G242400 5.0kb downstream 5.0kb downstream 10248 true Chr09: 36345859-36356106 Phaseolus vulgaris
Phvul.009G242400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 36351107-36356106 Phaseolus vulgaris
Phvul.009G242400 10.0kb upstream 10.0kb upstream 15248 true Chr09: 36335859-36351106 Phaseolus vulgaris
Phvul.009G242400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 36335859-36345858 Phaseolus vulgaris
Phvul.009G242400 10.0kb downstream 10.0kb downstream 15248 true Chr09: 36345859-36361106 Phaseolus vulgaris
Phvul.009G242400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 36351107-36361106 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301864 5265 Fabidae View MSA
124069985 5270 Rosid View MSA
123749333 5271 Pentapetalae View MSA
122792398 5272 Eudicot View MSA
122047197 5273 Angiosperm View MSA
121348751 5274 Embryophyte View MSA
123428717 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.8512 0.0 72.0213    
cufflinks 32.8048 0.0 84.8033 High  
cufflinks 18.8479 0.0 49.2387   Low
cufflinks 18.1724 0.0 47.9347   Low
cufflinks 37.1246 0.0 95.9836 High  
cufflinks 28.7452 0.0 74.3162    
cufflinks 36.308 0.0 93.9764 High  
cufflinks 28.1167 0.0 72.677 High  
cufflinks 32.5235 0.0 84.0747 High  
cufflinks 34.892 0.0 90.2233    
cufflinks 46.6693 0.0 121.275 High High

0 Strain