Gene : Phvul.009G243600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11785:SF267 - CATIONIC AMINO ACID TRANSPORTER 5 Genomic Order:  2494
Name:  ? Phvul.009G243600 Secondary Identifier:  ? PAC:37149912
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G243600 0.5kb upstream 0.5kb upstream 2273 true Chr09: 36445484-36447756 Phaseolus vulgaris
Phvul.009G243600 0.5kb upstream 0.5kb upstream 500 false Chr09: 36445484-36445983 Phaseolus vulgaris
Phvul.009G243600 0.5kb downstream 0.5kb downstream 2273 true Chr09: 36445984-36448256 Phaseolus vulgaris
Phvul.009G243600 0.5kb downstream 0.5kb downstream 500 false Chr09: 36447757-36448256 Phaseolus vulgaris
Phvul.009G243600 1.0kb upstream 1.0kb upstream 2773 true Chr09: 36444984-36447756 Phaseolus vulgaris
Phvul.009G243600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 36444984-36445983 Phaseolus vulgaris
Phvul.009G243600 1.0kb downstream 1.0kb downstream 2773 true Chr09: 36445984-36448756 Phaseolus vulgaris
Phvul.009G243600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 36447757-36448756 Phaseolus vulgaris
Phvul.009G243600 2.0kb upstream 2.0kb upstream 3773 true Chr09: 36443984-36447756 Phaseolus vulgaris
Phvul.009G243600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 36443984-36445983 Phaseolus vulgaris
Phvul.009G243600 2.0kb downstream 2.0kb downstream 3773 true Chr09: 36445984-36449756 Phaseolus vulgaris
Phvul.009G243600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 36447757-36449756 Phaseolus vulgaris
Phvul.009G243600 5.0kb upstream 5.0kb upstream 6773 true Chr09: 36440984-36447756 Phaseolus vulgaris
Phvul.009G243600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 36440984-36445983 Phaseolus vulgaris
Phvul.009G243600 5.0kb downstream 5.0kb downstream 6773 true Chr09: 36445984-36452756 Phaseolus vulgaris
Phvul.009G243600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 36447757-36452756 Phaseolus vulgaris
Phvul.009G243600 10.0kb upstream 10.0kb upstream 11773 true Chr09: 36435984-36447756 Phaseolus vulgaris
Phvul.009G243600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 36435984-36445983 Phaseolus vulgaris
Phvul.009G243600 10.0kb downstream 10.0kb downstream 11773 true Chr09: 36445984-36457756 Phaseolus vulgaris
Phvul.009G243600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 36447757-36457756 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309119 5265 Fabidae View MSA
124065749 5270 Rosid View MSA
123753183 5271 Pentapetalae View MSA
122795315 5272 Eudicot View MSA
122045421 5273 Angiosperm View MSA
121350184 5274 Embryophyte View MSA
123428616 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.30678 0.0 9.93864    
cufflinks 2.73249 0.0 8.38093    
cufflinks 5.05707 0.0 14.4404    
cufflinks 3.06465 0.0 9.3529    
cufflinks 3.38471 0.0 10.2026    
cufflinks 2.9556 0.0 8.98411    
cufflinks 0.0212875 0.0 0.104256 Low Low
cufflinks 0.326629 0.0 1.24558 Low  
cufflinks 0.0461189 0.0 0.208388 Low Low
cufflinks 11.3179 0.0 30.2374   High
cufflinks 4.06839 0.0 11.9897    

0 Strain