Gene : Phvul.009G232500 P. vulgaris v2.1
Defline:  (1 of 4) PTHR23421:SF74 - BETA-GALACTOSIDASE 1 Genomic Order:  2374
Name:  ? Phvul.009G232500 Secondary Identifier:  ? PAC:37151089
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G232500 0.5kb upstream 0.5kb upstream 6896 true Chr09: 34915000-34921895 Phaseolus vulgaris
Phvul.009G232500 0.5kb upstream 0.5kb upstream 500 false Chr09: 34921396-34921895 Phaseolus vulgaris
Phvul.009G232500 0.5kb downstream 0.5kb downstream 6896 true Chr09: 34914500-34921395 Phaseolus vulgaris
Phvul.009G232500 0.5kb downstream 0.5kb downstream 500 false Chr09: 34914500-34914999 Phaseolus vulgaris
Phvul.009G232500 1.0kb upstream 1.0kb upstream 7396 true Chr09: 34915000-34922395 Phaseolus vulgaris
Phvul.009G232500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34921396-34922395 Phaseolus vulgaris
Phvul.009G232500 1.0kb downstream 1.0kb downstream 7396 true Chr09: 34914000-34921395 Phaseolus vulgaris
Phvul.009G232500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34914000-34914999 Phaseolus vulgaris
Phvul.009G232500 2.0kb upstream 2.0kb upstream 8396 true Chr09: 34915000-34923395 Phaseolus vulgaris
Phvul.009G232500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34921396-34923395 Phaseolus vulgaris
Phvul.009G232500 2.0kb downstream 2.0kb downstream 8396 true Chr09: 34913000-34921395 Phaseolus vulgaris
Phvul.009G232500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34913000-34914999 Phaseolus vulgaris
Phvul.009G232500 5.0kb upstream 5.0kb upstream 11396 true Chr09: 34915000-34926395 Phaseolus vulgaris
Phvul.009G232500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34921396-34926395 Phaseolus vulgaris
Phvul.009G232500 5.0kb downstream 5.0kb downstream 11396 true Chr09: 34910000-34921395 Phaseolus vulgaris
Phvul.009G232500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34910000-34914999 Phaseolus vulgaris
Phvul.009G232500 10.0kb upstream 10.0kb upstream 16396 true Chr09: 34915000-34931395 Phaseolus vulgaris
Phvul.009G232500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34921396-34931395 Phaseolus vulgaris
Phvul.009G232500 10.0kb downstream 10.0kb downstream 16396 true Chr09: 34905000-34921395 Phaseolus vulgaris
Phvul.009G232500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34905000-34914999 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313819 5265 Fabidae View MSA
124070593 5270 Rosid View MSA
123743472 5271 Pentapetalae View MSA
122770672 5272 Eudicot View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 813.499 0.0 4064.1 High High
cufflinks 83.7778 0.0 247.159 High  
cufflinks 41.7817 0.0 113.924 High  
cufflinks 7.23956 0.0 19.2337   Low
cufflinks 105.317 0.0 318.829 High  
cufflinks 23.7998 0.0 62.2207    
cufflinks 50.0015 0.0 138.739 High  
cufflinks 12.6841 0.0 32.7957   Low
cufflinks 178.114 0.0 598.029 High  
cufflinks 75.7698 0.0 220.133 High  
cufflinks 66.9806 0.0 190.852 High  

0 Strain