Gene : Phvul.009G231700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR13878//PTHR13878:SF14 - GULONOLACTONE OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  2366
Name:  ? Phvul.009G231700 Secondary Identifier:  ? PAC:37150982
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G231700 0.5kb upstream 0.5kb upstream 4422 true Chr09: 34780537-34784958 Phaseolus vulgaris
Phvul.009G231700 0.5kb upstream 0.5kb upstream 500 false Chr09: 34784459-34784958 Phaseolus vulgaris
Phvul.009G231700 0.5kb downstream 0.5kb downstream 4422 true Chr09: 34780037-34784458 Phaseolus vulgaris
Phvul.009G231700 0.5kb downstream 0.5kb downstream 500 false Chr09: 34780037-34780536 Phaseolus vulgaris
Phvul.009G231700 1.0kb upstream 1.0kb upstream 4922 true Chr09: 34780537-34785458 Phaseolus vulgaris
Phvul.009G231700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34784459-34785458 Phaseolus vulgaris
Phvul.009G231700 1.0kb downstream 1.0kb downstream 4922 true Chr09: 34779537-34784458 Phaseolus vulgaris
Phvul.009G231700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34779537-34780536 Phaseolus vulgaris
Phvul.009G231700 2.0kb upstream 2.0kb upstream 5922 true Chr09: 34780537-34786458 Phaseolus vulgaris
Phvul.009G231700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34784459-34786458 Phaseolus vulgaris
Phvul.009G231700 2.0kb downstream 2.0kb downstream 5922 true Chr09: 34778537-34784458 Phaseolus vulgaris
Phvul.009G231700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34778537-34780536 Phaseolus vulgaris
Phvul.009G231700 5.0kb upstream 5.0kb upstream 8922 true Chr09: 34780537-34789458 Phaseolus vulgaris
Phvul.009G231700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34784459-34789458 Phaseolus vulgaris
Phvul.009G231700 5.0kb downstream 5.0kb downstream 8922 true Chr09: 34775537-34784458 Phaseolus vulgaris
Phvul.009G231700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34775537-34780536 Phaseolus vulgaris
Phvul.009G231700 10.0kb upstream 10.0kb upstream 13922 true Chr09: 34780537-34794458 Phaseolus vulgaris
Phvul.009G231700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34784459-34794458 Phaseolus vulgaris
Phvul.009G231700 10.0kb downstream 10.0kb downstream 13922 true Chr09: 34770537-34784458 Phaseolus vulgaris
Phvul.009G231700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34770537-34780536 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314246 5265 Fabidae View MSA
124067261 5270 Rosid View MSA
123742182 5271 Pentapetalae View MSA
122770229 5272 Eudicot View MSA
122051294 5273 Angiosperm View MSA
121312401 5274 Embryophyte View MSA
123349577 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.95282 0.0 13.8128    
cufflinks 3.78439 0.0 10.851    
cufflinks 0.472748 0.0 1.70721 Low  
cufflinks 5.51436 0.0 15.2743    
cufflinks 0.552815 0.0 1.97019 Low  
cufflinks 0.0364444 0.0 0.163562 Low Low
cufflinks 2.41698 0.0 7.2454    
cufflinks 3.04728 0.0 8.91754    
cufflinks 4.15148 0.0 11.7465    
cufflinks 0.794216 0.0 2.71954    
cufflinks 0.722267 0.0 2.49876    

0 Strain