Gene : Phvul.009G231900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12789 - DENSITY-REGULATED PROTEIN HOMOLOG Genomic Order:  2368
Name:  ? Phvul.009G231900 Secondary Identifier:  ? PAC:37150090
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G231900 0.5kb upstream 0.5kb upstream 3961 true Chr09: 34840367-34844327 Phaseolus vulgaris
Phvul.009G231900 0.5kb upstream 0.5kb upstream 500 false Chr09: 34840367-34840866 Phaseolus vulgaris
Phvul.009G231900 0.5kb downstream 0.5kb downstream 3961 true Chr09: 34840867-34844827 Phaseolus vulgaris
Phvul.009G231900 0.5kb downstream 0.5kb downstream 500 false Chr09: 34844328-34844827 Phaseolus vulgaris
Phvul.009G231900 1.0kb upstream 1.0kb upstream 4461 true Chr09: 34839867-34844327 Phaseolus vulgaris
Phvul.009G231900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34839867-34840866 Phaseolus vulgaris
Phvul.009G231900 1.0kb downstream 1.0kb downstream 4461 true Chr09: 34840867-34845327 Phaseolus vulgaris
Phvul.009G231900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34844328-34845327 Phaseolus vulgaris
Phvul.009G231900 2.0kb upstream 2.0kb upstream 5461 true Chr09: 34838867-34844327 Phaseolus vulgaris
Phvul.009G231900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34838867-34840866 Phaseolus vulgaris
Phvul.009G231900 2.0kb downstream 2.0kb downstream 5461 true Chr09: 34840867-34846327 Phaseolus vulgaris
Phvul.009G231900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34844328-34846327 Phaseolus vulgaris
Phvul.009G231900 5.0kb upstream 5.0kb upstream 8461 true Chr09: 34835867-34844327 Phaseolus vulgaris
Phvul.009G231900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34835867-34840866 Phaseolus vulgaris
Phvul.009G231900 5.0kb downstream 5.0kb downstream 8461 true Chr09: 34840867-34849327 Phaseolus vulgaris
Phvul.009G231900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34844328-34849327 Phaseolus vulgaris
Phvul.009G231900 10.0kb upstream 10.0kb upstream 13461 true Chr09: 34830867-34844327 Phaseolus vulgaris
Phvul.009G231900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34830867-34840866 Phaseolus vulgaris
Phvul.009G231900 10.0kb downstream 10.0kb downstream 13461 true Chr09: 34840867-34854327 Phaseolus vulgaris
Phvul.009G231900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34844328-34854327 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301489 5265 Fabidae View MSA
124070344 5270 Rosid View MSA
123750636 5271 Pentapetalae View MSA
122790029 5272 Eudicot View MSA
122051404 5273 Angiosperm View MSA
121346997 5274 Embryophyte View MSA
123423903 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.1562 0.0 140.694 High  
cufflinks 48.6363 0.0 125.89 High  
cufflinks 28.5422 0.0 74.144   Low
cufflinks 66.1377 0.0 172.564 High High
cufflinks 45.3304 0.0 117.178 High  
cufflinks 22.5112 0.0 59.1008   Low
cufflinks 29.9438 0.0 77.6801 High  
cufflinks 34.8352 0.0 90.1059 High  
cufflinks 36.55 0.0 94.5151 High  
cufflinks 53.9209 0.0 139.782 High  
cufflinks 53.2819 0.0 138.046 High  

0 Strain