Gene : Phvul.009G232700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10071//PTHR10071:SF191 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // SUBFAMILY NOT NAMED Genomic Order:  2376
Name:  ? Phvul.009G232700 Secondary Identifier:  ? PAC:37151985
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G232700 0.5kb upstream 0.5kb upstream 2407 true Chr09: 34951724-34954130 Phaseolus vulgaris
Phvul.009G232700 0.5kb upstream 0.5kb upstream 500 false Chr09: 34951724-34952223 Phaseolus vulgaris
Phvul.009G232700 0.5kb downstream 0.5kb downstream 2407 true Chr09: 34952224-34954630 Phaseolus vulgaris
Phvul.009G232700 0.5kb downstream 0.5kb downstream 500 false Chr09: 34954131-34954630 Phaseolus vulgaris
Phvul.009G232700 1.0kb upstream 1.0kb upstream 2907 true Chr09: 34951224-34954130 Phaseolus vulgaris
Phvul.009G232700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 34951224-34952223 Phaseolus vulgaris
Phvul.009G232700 1.0kb downstream 1.0kb downstream 2907 true Chr09: 34952224-34955130 Phaseolus vulgaris
Phvul.009G232700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 34954131-34955130 Phaseolus vulgaris
Phvul.009G232700 2.0kb upstream 2.0kb upstream 3907 true Chr09: 34950224-34954130 Phaseolus vulgaris
Phvul.009G232700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 34950224-34952223 Phaseolus vulgaris
Phvul.009G232700 2.0kb downstream 2.0kb downstream 3907 true Chr09: 34952224-34956130 Phaseolus vulgaris
Phvul.009G232700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 34954131-34956130 Phaseolus vulgaris
Phvul.009G232700 5.0kb upstream 5.0kb upstream 6907 true Chr09: 34947224-34954130 Phaseolus vulgaris
Phvul.009G232700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 34947224-34952223 Phaseolus vulgaris
Phvul.009G232700 5.0kb downstream 5.0kb downstream 6907 true Chr09: 34952224-34959130 Phaseolus vulgaris
Phvul.009G232700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 34954131-34959130 Phaseolus vulgaris
Phvul.009G232700 10.0kb upstream 10.0kb upstream 11907 true Chr09: 34942224-34954130 Phaseolus vulgaris
Phvul.009G232700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 34942224-34952223 Phaseolus vulgaris
Phvul.009G232700 10.0kb downstream 10.0kb downstream 11907 true Chr09: 34952224-34964130 Phaseolus vulgaris
Phvul.009G232700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 34954131-34964130 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296650 5265 Fabidae View MSA
124071935 5270 Rosid View MSA
123749447 5271 Pentapetalae View MSA
122796147 5272 Eudicot View MSA
122045626 5273 Angiosperm View MSA
121350500 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6287 0.0 31.8717    
cufflinks 10.1928 0.0 28.3199    
cufflinks 19.0097 0.0 50.1144    
cufflinks 1.65297 0.0 5.64607    
cufflinks 1.57999 0.0 5.44021    
cufflinks 13.3185 0.0 36.1039    
cufflinks 0.0297452 0.0 0.145677 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 14.0317 0.0 38.0186    
cufflinks 1.25467 0.0 4.40944    

0 Strain