Gene : Phvul.009G233500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10168:SF112 - GLUTAREDOXIN-C4 Genomic Order:  2384
Name:  ? Phvul.009G233500 Secondary Identifier:  ? PAC:37151248
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris THIOREDOX-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G233500 0.5kb upstream 0.5kb upstream 2417 true Chr09: 35043469-35045885 Phaseolus vulgaris
Phvul.009G233500 0.5kb upstream 0.5kb upstream 500 false Chr09: 35045386-35045885 Phaseolus vulgaris
Phvul.009G233500 0.5kb downstream 0.5kb downstream 2417 true Chr09: 35042969-35045385 Phaseolus vulgaris
Phvul.009G233500 0.5kb downstream 0.5kb downstream 500 false Chr09: 35042969-35043468 Phaseolus vulgaris
Phvul.009G233500 1.0kb upstream 1.0kb upstream 2917 true Chr09: 35043469-35046385 Phaseolus vulgaris
Phvul.009G233500 1.0kb upstream 1.0kb upstream 1000 false Chr09: 35045386-35046385 Phaseolus vulgaris
Phvul.009G233500 1.0kb downstream 1.0kb downstream 2917 true Chr09: 35042469-35045385 Phaseolus vulgaris
Phvul.009G233500 1.0kb downstream 1.0kb downstream 1000 false Chr09: 35042469-35043468 Phaseolus vulgaris
Phvul.009G233500 2.0kb upstream 2.0kb upstream 3917 true Chr09: 35043469-35047385 Phaseolus vulgaris
Phvul.009G233500 2.0kb upstream 2.0kb upstream 2000 false Chr09: 35045386-35047385 Phaseolus vulgaris
Phvul.009G233500 2.0kb downstream 2.0kb downstream 3917 true Chr09: 35041469-35045385 Phaseolus vulgaris
Phvul.009G233500 2.0kb downstream 2.0kb downstream 2000 false Chr09: 35041469-35043468 Phaseolus vulgaris
Phvul.009G233500 5.0kb upstream 5.0kb upstream 6917 true Chr09: 35043469-35050385 Phaseolus vulgaris
Phvul.009G233500 5.0kb upstream 5.0kb upstream 5000 false Chr09: 35045386-35050385 Phaseolus vulgaris
Phvul.009G233500 5.0kb downstream 5.0kb downstream 6917 true Chr09: 35038469-35045385 Phaseolus vulgaris
Phvul.009G233500 5.0kb downstream 5.0kb downstream 5000 false Chr09: 35038469-35043468 Phaseolus vulgaris
Phvul.009G233500 10.0kb upstream 10.0kb upstream 11917 true Chr09: 35043469-35055385 Phaseolus vulgaris
Phvul.009G233500 10.0kb upstream 10.0kb upstream 10000 false Chr09: 35045386-35055385 Phaseolus vulgaris
Phvul.009G233500 10.0kb downstream 10.0kb downstream 11917 true Chr09: 35033469-35045385 Phaseolus vulgaris
Phvul.009G233500 10.0kb downstream 10.0kb downstream 10000 false Chr09: 35033469-35043468 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307786 5265 Fabidae View MSA
124064046 5270 Rosid View MSA
123741506 5271 Pentapetalae View MSA
122793687 5272 Eudicot View MSA
122043796 5273 Angiosperm View MSA
121344746 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.1106 0.0 100.726 High  
cufflinks 43.9975 0.0 118.036 High  
cufflinks 32.009 0.0 87.9335    
cufflinks 80.1542 0.0 208.071 High High
cufflinks 28.1622 0.0 79.1501    
cufflinks 28.8293 0.0 80.1456    
cufflinks 25.7818 0.0 72.4894    
cufflinks 42.3555 0.0 114.023 High  
cufflinks 31.3346 0.0 86.7449 High  
cufflinks 25.8727 0.0 72.9963    
cufflinks 29.3115 0.0 81.7315    

0 Strain